Vitis vinifera (wine grape): 100245198
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Entry
100245198 CDS
T01084
Name
(RefSeq) autophagy-related protein 13A
KO
K08331
autophagy-related protein 13
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100245198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100245198
03029 Mitochondrial biogenesis [BR:
vvi03029
]
100245198
Membrane trafficking [BR:
vvi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100245198
Atg1 complex
100245198
Mitochondrial biogenesis [BR:
vvi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100245198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100245198
NCBI-ProteinID:
XP_002269623
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Position
16:complement(join(26560583..26560895,26563638..26563819,26563930..26565309))
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AA seq
624 aa
AA seq
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MDLQSHPQPELGRLEQIVSQFLLKSLHIVLDSRIPSLRPARDRSGNVSGISRVRKSDKWF
SLQLGDRPAALDNLHFWHRNLMDPMIIDIILVREGSNSSSSMDNVYSTAAVGTSVETVIE
RWVVQYESPRLMATPTGESSATYKKIYKKLIILLRSLYSTIRLLPGYRVFRLLSSLTQSY
DFDIIYKVSSFTEPFSRAEEEVMKHYSFLPVEALSGRLCISVTYHQTLSDFNLEPLTAFP
PTIITDYVGSPAADPLKAFPSSEKGIRATSFPLRGRGVRSPSSAPFQRPHSWTSGGHRAA
PFTPNQPLSGSPPAFRMPYMPYDLPTQPLDIYGHGVQNYRPPTHQKATSFDEYQLSPPFS
PSQSPSPPTYFSSSNPMYSRFSSETAPVTIPLPLVGRGSRYLSPNSSDPSRHSLPPLSPR
STRHDPSSQESPSGNRSFRKTEGLRIGEYSGTTNNYSGQKVLKDSKDDSGRFSGLLSSSG
SPRIGFSRCSSRLSFQDDLDDCDFSGPFDVDDVDTTDSHASQNLDGKRASEFPSLAFPMT
GKSPDAAVGVLVNMLRRAPPLRQDPSCCSSHSLKTEPEGEAGAASEFFMARKTADALEEL
RSYKEMKDLLLSKSGAHVVTREET
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcagagccatcctcagcccgagttggggcggttggaacaaatagtttcgcaa
tttcttttgaagagcttgcacattgtactagactctaggatcccttctcttcggccggcc
cgtgatcggagtggtaatgtttcggggatttctcgggttaggaagagtgacaaatggttc
agtttacaactaggagaccgccctgctgctttggataatttgcatttctggcataggaac
ttgatggatcctatgataattgatataatacttgttcgggaagggtcaaattcttcatcg
tctatggacaatgtatatagtactgcagcagtagggacatcggttgagactgtaatagag
aggtgggttgttcagtacgagtctccacggttgatggctactcctactggtgaaagttca
gccacctacaagaaaatttacaagaagttgatcatacttttgcggtcactttattcaaca
ataaggcttcttcctggctatcgggtttttcggctgctaagttcattgactcaaagttac
gatttcgatataatttacaaggtttcatcatttactgagccgttctcaagggcagaggag
gaagtgatgaagcattatagttttttgcctgtagaggccctttctggtcgcctctgtata
tctgtgacatatcatcaaacactttctgatttcaaccttgagcccttgacagcgtttccg
ccaacgattattacagattatgttggtagccctgctgctgatcctctgaaggctttcccc
tcgtcagagaagggtattcgtgctacttcctttccattgcgaggacgaggagtacgatct
ccgtcttctgcaccatttcaacgcccacacagctggacgagtggtggccacagagcagct
ccttttacaccaaatcaacctctcagtgggtctccaccggcatttcgcatgccttatatg
ccatatgatcttccgactcaacctcttgatatatatggtcatggggtccaaaactataga
cccccaacccatcagaaggctaccagttttgatgagtatcaactttcacctccattttcg
ccatcacagtccccatctcccccgacatacttttccagtagtaaccctatgtattctcgt
ttctcttcagaaactgctcctgtaactatcccacttccattggtgggcagaggctctagg
tacctttcgccaaattcatctgatcctagtagacattctcttccacctctgtctcccagg
agcacaaggcatgatccttcatcacaggagtctccatcgggaaataggtcatttagaaaa
acagaaggtttaaggataggagagtactctgggacaacaaataattattctggtcagaag
gtattgaaagatagcaaagatgattcagggcggttctcagggttgctatcttccagtggc
tcaccacgtattggcttttcaagatgctctagcagattatctttccaggatgacttggat
gattgtgacttctctggtccttttgatgtggatgatgttgatacaacagattcccatgcc
agtcagaaccttgatgggaaaagagcctcagagtttccttcactggcatttccaatgact
ggaaaatcaccagatgctgctgttggtgttcttgttaacatgctaaggagggcgcctcct
ctgcgccaagatccaagttgttgctcatcccactctttgaagactgaacccgagggagaa
gcgggtgcagcatctgaattttttatggctcgaaagacagctgatgcactggaagagctc
aggagttacaaagaaatgaaagacttactgctctctaagagtggagcacatgtggttact
agagaagaaacttaa
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