Vitis vinifera (wine grape): 100247024
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Entry
100247024 CDS
T01084
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100247024
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vvi01009
]
100247024
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
100247024
03036 Chromosome and associated proteins [BR:
vvi03036
]
100247024
Protein phosphatases and associated proteins [BR:
vvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100247024
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100247024
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100247024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
100247024
NCBI-ProteinID:
XP_002278196
UniProt:
F6I0Y2
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All DBs
Position
3:complement(join(2014396..2014749,2015209..2016258))
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AA seq
467 aa
AA seq
DB search
MGVERNTPKASPKKKPTTTLQYLFDLDSKSNGNGHFSNSGKQSSLDSENEELLSIITYCT
FVFTFTDPSESPSQQDLKRLKLTQLLSLVKSTKKPLHDQILSHLVAMLSANLFRPLPPSS
NASVIFDLPDEEDTASTPAPAWPHLQIVYEILLRLVLNTDAKALRDHIDHSFVLNLLSLF
QSEDPRERESLKNVYHRIYSKFTFYRSFMRKAMNDVFLHYVFETERPCGIGDLLEIWGSI
INGFTIPLKEEHKLFLMRVLIPLHKPKGLQVYHRQLAYCVSQFVQKEPVLGGIVVRGILK
YWPITNCQKQVLLVGELEELVEIIDPEQYRKLALPLFTQITRCLNSWNSQVAERALYVLN
NEQFRKMAQEAMDEVFPVIVEGMEKNLKWHWSKSVRQLTQTVKVMLEEMEPCLYSKCVIN
LELRESAAQQEEIKRREKWERIERAADAATAAQNQFLQPPHCICVSN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtagaaagaaacaccccaaaagcctctcccaagaaaaaacctaccaccaccctt
cagtacctctttgatctggattctaagagcaatggcaatggccatttcagcaacagtggg
aaacaatcttctctggattccgaaaatgaagagctcctctctatcatcacatactgcacc
tttgtcttcacctttactgatccttctgaatctccttcacagcaagatctcaagaggctc
aagctcactcaacttctctcccttgtgaagtccacaaagaagccactccatgatcaaatt
ttgtcacatctggttgccatgctatctgccaacctctttcgccccctccctccatcttcc
aatgcctctgtcatctttgacttacctgatgaggaagacaccgcttctactcctgcacct
gcttggccacacctgcaaattgtttatgagattcttcttcggctagtcctcaacacagat
gccaaggcactgcgtgatcatatagatcattcattcgttctcaacctcctctcccttttc
caatctgaagacccacgagaacgggaaagcttgaagaacgtgtaccacaggatatattcc
aagttcaccttctaccgatcattcatgagaaaagcaatgaatgatgtattcttgcactat
gtttttgagacagagcggccctgtggcattggcgatctgcttgaaatttggggcagcata
atcaatggcttcaccattccactcaaggaagagcacaagttattcttgatgagagtgctt
attcccttgcacaagcccaaggggttgcaggtttaccataggcagctggcttactgtgtc
tcccagtttgtgcagaaggagcctgtgcttggtgggattgttgttcgaggtattctaaaa
tattggccgatcacaaactgccagaaacaagttttgcttgtgggagaactggaagaattg
gtggagattatagatcctgagcaatataggaagttggctctgcctttattcacccaaatc
acaaggtgcttaaacagttggaactcacaggtagcagagcgtgccctctacgtattgaac
aacgagcagttcaggaagatggcacaagaggcaatggacgaggtgtttccagtgatagtt
gaaggcatggagaagaaccttaaatggcactggagcaaaagcgttcgccaattgacacaa
accgtgaaggtgatgctggaagaaatggagccgtgtttatactccaagtgtgtaataaac
cttgaactccgagaatctgcagctcaacaagaggagatcaaaagaagagagaaatgggaa
aggattgaacgggctgctgatgctgctactgctgcccagaatcagttcctccaaccacca
cattgtatatgtgtttccaactga
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