KEGG   Vitis vinifera (wine grape): 100254023
Entry
100254023         CDS       T01084                                 
Name
(RefSeq) protein NUCLEOLAR FACTOR 1
  KO
K14774  U3 small nucleolar RNA-associated protein 25
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvi03009]
    100254023
Ribosome biogenesis [BR:vvi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100254023
SSDB
Motif
Pfam: UTP25 U3_assoc_6
Other DBs
NCBI-GeneID: 100254023
NCBI-ProteinID: XP_002267174
UniProt: D7UBL1
LinkDB
Position
11:complement(join(16081243..16081317,16081470..16081541,16081648..16081710,16082874..16082979,16083144..16083238,16083347..16083376,16086336..16086407,16088923..16088982,16089257..16089303,16089851..16089915,16090244..16090332,16090456..16090494,16090620..16090679,16092985..16093057,16095959..16096161,16107105..16107185,16114469..16114600,16114708..16114808,16118439..16118562,16121249..16121393,16126158..16126317,16127264..16127358,16128254..16128389,16128702..16128803,16129140..16129176))
AA seq 753 aa
MGKRFGRKRGARGLKGTNTPAKYDTSKRVRRRTEEKVASSPSPSSSGESSDEQSSGVASE
EEVVYKEPSMYDNLLFTLGTGSESLANAYKRRRRDEEGRSDSEEDINGGSESLTVSEEED
NEEGTDNESARGHASESIMEQSEDAETEDDNEASDTDQMHDLDVDDQSAVGASESTSSFT
SHVGHKLSKEEVDNLTRRKWKYNWEMPAFDMSSCKWMGTGESFLKDVNTSSGYDLKLKLY
KHWLENYKTSGGNDFHSSKQRLFFSLCNSYRDILYCNKKPFYLKGQEEDSCIMDAYIMHA
LNHIFRTGDLVTKNDSKVAKHQETVKEEILTGDSFLDHGFTRPKVLILLPLASIALRVVK
RLIQLTPSSSKVNVEHIDRFSDEFGTGVVEDDQEQNELFQKVQDYENSIVQKSSKPSDFQ
ALFGANNNDHFMIGIKFTRRTIKLYSDFYSSDMIIASPLGLITKIGEAEVEKEKDVDYLS
SIEVLVIDHADVISMQNWSHVNSVVEQLNRIPSKQHGTDIMRIRQWYLDGHAQFYRQTII
LGSYLNPDMNASFNHHCVNYQGKVKLVCEYKGALAKVLLQVRQIYERFDADSVVDSDDAR
FEYFTTKVFPKIKDSIQGGIMLFVSSYFEYVRIRNFLKSQNASFCLLGEYTKQSDISRAR
VWFFEGKRKIMLYTERAHFYHRYKIRGIQNLIIYSLPERKEFYPEIVNMLEGSHNMTCTV
LFSRFDQFRLERIVGSGPAKRMVASEKNVFVFC
NT seq 2262 nt   +upstreamnt  +downstreamnt
atgggaaaacgattcgggagaaaacgaggtgcccgaggattgaagggaactaatacacct
gccaagtatgacacaagcaagcgtgtaaggagacgaactgaagagaaggttgctagtagc
ccctcacccagttcctcaggggaatcatctgacgaacaatcaagtggtgtggcttctgaa
gaagaagtggtttataaggaaccatctatgtatgacaatttattgtttacattgggaacg
ggtagtgaatctcttgccaatgcatataaaaggagacgaagagatgaagaaggtagaagt
gactctgaagaagacatcaatggtggttctgaatctttgacagtgtctgaagaagaggac
aatgaggaaggtactgataatgagtctgccaggggtcatgctagtgaaagtattatggag
cagagtgaagatgctgaaactgaagatgacaatgaggcttctgacacagatcaaatgcat
gacctagatgttgatgatcaatctgctgttggtgcatcagagagcacaagttcctttacc
agtcacgtgggccacaaattatcaaaagaagaagttgacaatctaacacgaaggaaatgg
aaatataattgggagatgcctgcttttgacatgtcaagttgcaagtggatgggtacaggg
gagtcttttctaaaggatgttaacaccagttctggctatgatctcaagctaaaattgtac
aagcattggttggaaaactataagacatctggtggcaatgattttcattcatccaagcaa
agattgttcttctctctatgtaacagctatcgagatatactgtactgtaacaagaagccc
ttttatctcaaaggccaggaagaagattcttgtatcatggatgcttatattatgcatgcg
cttaatcacatattcagaacgggagatcttgtgaccaagaatgattcaaaagtggccaag
caccaagagacagttaaagaggaaattctaactggtgatagtttccttgaccatgggttt
actcgtcctaaggttctgatcttattaccacttgcaagcattgcacttcgtgttgttaag
aggctaatacaactgactccttcatcaagcaaggttaatgtggagcacattgatcgtttc
tctgatgagtttggaactggagtggttgaagatgaccaggagcaaaatgagttattccag
aaagttcaggattatgaaaattcaatagttcaaaaatcttcaaaaccttccgactttcaa
gcgctttttggtgcaaacaacaatgatcactttatgataggcattaagtttaccaggagg
accataaagttgtacagtgatttctattcctcagacatgattattgcttctccccttggt
ttaataactaaaattggggaggctgaggtagaaaaggaaaaagatgttgattatctttct
tctatagaggttctagtgattgatcatgcagatgtaatatcaatgcagaattggtcccat
gtgaattcagttgttgaacaattgaaccgcataccttctaagcagcatggaactgatatt
atgcgcattaggcaatggtatctagatggacatgcacagttttatcggcaaacaataatt
ttgggttcttatttaaacccagatatgaatgcctcattcaatcaccattgtgttaactac
caaggaaaggtgaagttggtctgtgaatataaaggtgctcttgcgaaagtactacttcaa
gtgcggcagatttatgagcgttttgatgcagattcagtagtagattctgatgatgctcgc
tttgaatattttactacgaaggtttttcccaagataaaagattctattcagggtgggatt
atgctatttgtcagttcttattttgagtatgttcgtataagaaacttcttgaagtctcaa
aatgcatccttctgtttgcttggagagtacacaaaacaaagtgatatttctcgtgcacgg
gtttggttttttgaaggaaagcgaaaaatcatgctttacactgaaagagctcacttttat
cacagatacaagatccgaggcattcagaatctaatcatctattctctccctgagaggaaa
gaattttaccctgagattgtgaatatgcttgaagggtcccataacatgacttgcactgtg
cttttttctcgctttgatcaattccggctggagaggatagtaggaagtgggccagcaaaa
aggatggtggcatcagagaagaatgtttttgtcttctgttag

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