KEGG   Vibrio vulnificus CMCP6: VV1_0949
Entry
VV1_0949          CDS       T00108                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
vvu  Vibrio vulnificus CMCP6
Pathway
vvu03420  Nucleotide excision repair
vvu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VV1_0949 (uvrD)
   03430 Mismatch repair
    VV1_0949 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvu03400]
    VV1_0949 (uvrD)
Enzymes [BR:vvu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VV1_0949 (uvrD)
DNA repair and recombination proteins [BR:vvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VV1_0949 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     VV1_0949 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_12 AAA_11
Other DBs
NCBI-ProteinID: AAO09444
UniProt: A0A3Q0L2Y4
LinkDB
Position
I:complement(955030..957204)
AA seq 724 aa
MIDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
QRLLKRLIKAQNLDDKQWPARQVAWWINGKKDEGLRPAHIDAYHDPVTKTYLQLYTAYQE
ACDRAGLVDFAEILLRAHELLRENKFIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
ECHVMIVGDDDQSIYGWRGAKVENIEKFTLEFPSVNTIRLEQNYRSTKTILEASNALIAN
NTERMGKELWTDGVEGEPISIYSAYNELDEARFAVNKIKEWQDKGGVLNDAAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGLG
DKTLETVRFAARDRGCTLWEASIALIEEKVLTGRAAGALSRFIELITALEDDSFEMPLHI
QTDHVIKSSGLYTMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEEMSLLTAFLTHAA
LEAGEGQADDFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPESCLDEVRMKAQVSRPASSGRF
SQTVVKESFNETGFSLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAR
LEKL
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgatcgatccttcacttcttctcgatggcttgaacgacaaacagcgtgaggctgttgct
gcacctttggaaaacttgctggtgttggcaggcgcaggcagtggtaaaacgcgcgttctt
gtgcatcgcattgcttggctaatgtcagtcgagcaggcttctccgttttctattatgtct
gtgacctttaccaataaggcggcggcggagatgcgtggtcgaatcgaagagttgatgatg
ggcagtgcgtcgggcatgtggaatggcaccttccacggtatttgccaccgaattctcaga
gcgcactatctggatgccaagctgccggaagatttccaaattattgatagcgacgaccaa
caacgtttgcttaagcgactgatcaaagcgcaaaacctggatgacaaacagtggccagcg
cgccaagtcgcttggtggatcaatggcaaaaaagacgaaggattacgccctgcgcacatc
gatgcctaccacgatcccgtgaccaaaacctacctacagttgtacaccgcctatcaagaa
gcgtgtgatcgcgcaggcttggtcgactttgcggagatcttgctgcgtgcgcatgagcta
ctgcgtgagaacaaatttatccgcgaacactatcaagcgcgctttaaacacatcttggtg
gacgagttccaagacaccaacaacattcaatacgcttggctgcgtatgatggcggggcct
gaatgccatgtgatgatcgtcggtgatgatgaccagtcgatttacggttggcgtggcgcg
aaagtggaaaacatcgaaaagttcacccttgagtttccgagcgtcaacaccattcgcctc
gagcaaaactaccgttcgaccaaaaccatcctagaagcctcaaacgccttgattgccaac
aataccgagcgtatgggcaaagagctgtggaccgatggcgtcgaaggtgaaccgatctcg
atttattctgcttacaacgaattggatgaagcgcgttttgcggtgaacaaaatcaaagag
tggcaggacaaaggcggcgtgttgaacgacgcagcgatgctttatcgcaataacgcccag
tcgcgtgtactggaagaagcgttgattcaagcgggtttgccttatcgcatttacggcggg
atgcgattcttcgagcgccaagagatcaaagatgcattgagctatctgcgcctcatcgcc
aaccgcaatgacgacgcggcctttgaacgtgtggttaatactccaacgcgtggcttaggg
gacaaaaccttggaaacggtgcgttttgccgcgcgcgatcgtggctgcaccttgtgggaa
gccagtatcgctttgatcgaagaaaaagtgttaacggggcgtgctgctggtgcgttaagt
cgctttatcgagctgatcacggcgctggaagacgacagctttgaaatgccactgcacatt
caaaccgaccatgtgatcaaatcctcaggcttgtacaccatgtatgagcaagagaaaggc
gagaagtccaaggctcgcattgagaacttggaagagttggtcacggcgacacgtcagttt
gaaaaaccggaagaagccgaagagatgagtttgctcactgctttcttaacccatgccgct
ttggaggcgggtgaaggtcaagcggacgatttcgaagatgcggtacaactgatgacctta
cacagcgccaaaggattggagttcccattggtgtttatggtgggcgtggaagaaggcatg
ttcccgagccagatgtccgccgaagaagcgggccgcttagaagaagagcgccgtttgtgc
tacgtgggcatgactcgggcaatgcagaagctctatattacctacgctgaaatgcgtcgt
ttgtacgggcaagacaaatatcataaaccatcacgttttatccgagagctgccggaaagc
tgcttggatgaagtgcgcatgaaagcgcaagtcagccgtcctgccagcagtggtcgcttt
agccaaactgtggtcaaagagagcttcaatgaaacgggcttttcgctcggctctcgtgtg
cgtcacccaaagtttggtgaagggacgatcatcaactttgaaggcagtgggccacaaagt
cgagttcaagtggccttcaatggggaaggaatcaagtggctagtgaccgcttacgcgagg
ctggaaaaactgtga

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