Vibrio vulnificus YJ016: VV0898
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Entry
VV0898 CDS
T00150
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy00260
Glycine, serine and threonine metabolism
vvy00460
Cyanoamino acid metabolism
vvy00630
Glyoxylate and dicarboxylate metabolism
vvy00670
One carbon pool by folate
vvy00680
Methane metabolism
vvy01100
Metabolic pathways
vvy01110
Biosynthesis of secondary metabolites
vvy01120
Microbial metabolism in diverse environments
vvy01200
Carbon metabolism
vvy01230
Biosynthesis of amino acids
vvy01240
Biosynthesis of cofactors
Module
vvy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VV0898
09102 Energy metabolism
00680 Methane metabolism
VV0898
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VV0898
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VV0898
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VV0898
Enzymes [BR:
vvy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VV0898
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAC93662
UniProt:
Q7MN19
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All DBs
Position
I:901221..902471
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AA seq
416 aa
AA seq
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MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMETLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVKNAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEADAKELANWMCDVLDNIGNEAVIEATKQKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaatatcgctgattacgatgcggagctattcgcagctatccag
gaagaaactcttcgccaggaagaacacatcgagctgatcgcttcagaaaactacacaagc
ccacgtgtaatggaagctcaaggctctcagctaaccaataagtacgctgaaggctaccca
ggcaagcgttactacggtggctgtgaatatgttgataaagcggaagctctcgcaattgat
cgcgcatgccagttgttcggttgtgaatatgcaaacgtacagcctcactcaggttctcaa
gcaaacagtgcagtgtatatggcgctgcttaacccaggcgacactgtattaggtatgagc
cttgcgcacggtggccacttgacgcacggctcaccagttaacttctctggtaagcactac
aacgttatcccttacggtatcgatgaagcgggtcaaattaactacgacgagatggaaacg
ctagcgcttgagcacaaacctaagatgatcatcggtggtttctcagcgtactctcaaatc
gttgattggaagcgcatgcgtgaaatcgcggacaaagttgacgcttacctattcgtcgat
atggcgcacgttgcgggtcttatcgcagcaggtgaatacccaacacctgtgccacacgca
cacgtagtaacgacaacgacgcacaaaacgctagcaggtccacgtggtggtcttatcctg
tctaacgctggcgaagacatgtacaagaaactgaactctgcggttttccctggtggccaa
ggcggtcctctaatgcacgttatcgcgggtaaagcagtagcgtttaaagaagcgatggaa
cctgagtttaaagcttaccaagcgcgcgtagtgaaaaacgcaaaagcgatggtggctcag
ttccaagagcgcggttacaagatcgtgtcaaacggtacagaaaaccacctgttccttgtt
gaccttatcgacaaagacattacgggtaaagatgcggatgcggcactaggcgcagcaaac
atcacggtaaacaagaactcagtgccaaacgaccctcgtagcccatttgtcacttcgggt
attcgtgttggtacgccagcgatcactcgccgtggctttactgaagcggacgcgaaagag
ctagcaaactggatgtgtgacgtactagacaacatcggcaatgaagcggttatcgaagcg
acgaaacagaaagtcctagaaatttgtaagcgtctacctgtttacgcataa
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