Vibrio vulnificus YJ016: VV2409
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Entry
VV2409 CDS
T00150
Name
(GenBank) Recombinational DNA repair protein
KO
K06187
recombination protein RecR
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VV2409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV2409
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VV2409
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VV2409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
PHF5
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
BAC95173
UniProt:
Q7MIV4
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Position
I:complement(2439865..2440467)
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AA seq
200 aa
AA seq
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MRTSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSHAMTEIGHCNEC
RTFTEEDVCHICNNPKRQENGLLCVVESPADIAAVEATGQFSGRYFVLMGHLSPLDGIGP
SDIGLDVLDYRLRRGDIKEVILATNPTVEGEATAHYIAELCREHKVDASRIAHGVPVGGE
LELVDGTTLSHSLLGRHKLN
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccagccatatgctggaacaattgatggaggccttacgttgtttgcctggggtt
ggccccaagtcagcacagcgtatggcctttcatttgttacagcgagatagaaaaggcggc
ctgcagcttgcggatgcattaagtcatgccatgacggaaattgggcattgtaacgagtgc
cgtacttttaccgaagaagacgtttgtcatatctgcaacaaccccaaacgccaagaaaac
ggattattatgtgtggtcgaaagccctgccgatatcgccgcggtggaagccacaggacaa
ttttctggtcgttactttgtgttgatggggcacctatcaccgcttgatggtattggacct
agtgatattggcctcgatgtcctcgattatcgtctgcgtcgcggtgatatcaaagaagtg
atcctagcgaccaaccctaccgtggaaggtgaagcgaccgcgcactacatcgctgaactc
tgtcgagagcataaagtggacgccagtcgaattgctcatggtgttccggtcggtggggag
cttgagctggtggatggcacgacgctctcccattcgttattgggcagacacaaactcaac
taa
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