Waddlia chondrophila: wcw_0679
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Entry
wcw_0679 CDS
T01255
Symbol
alr
Name
(GenBank) putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
wch
Waddlia chondrophila
Pathway
wch00300
Lysine biosynthesis
wch00470
D-Amino acid metabolism
wch00550
Peptidoglycan biosynthesis
wch01100
Metabolic pathways
wch01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
wch00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
wcw_0679 (alr)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
wcw_0679 (alr)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
wcw_0679 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
wcw_0679 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
wch01011
]
wcw_0679 (alr)
Enzymes [BR:
wch01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
wcw_0679 (alr)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
wcw_0679 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
wch01011
]
Precursor biosynthesis
Amino acid ligase
wcw_0679 (alr)
Racemase
wcw_0679 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ADI38046
UniProt:
D6YV85
LinkDB
All DBs
Position
complement(737999..740440)
Genome browser
AA seq
813 aa
AA seq
DB search
MDAFDLRNWSGFISAGGDSNRPALIDQIVIDTRRIYASNALFAALKGQRQDGHSFVSGSG
AKFALVEKHWEGPADGPSLLKVDDPLTAFQEIAGSYRSQLRGNVIAVIGSYGKTMVKDLL
RHLLSSSFTVASSPESFNSQVGVPLSLLGAAKAHEQVIIEAGFSHPGEMARLCKIIRPSH
IILTHVGNKHLHTIGSKEQIAQEMCHFSLSSDASWTLLPKDPILSPLPKPYYWDTPQPNL
PHASFHENSKAITVQFPKGDAHTILRPLGMSYILDLINIGLKAAYLLGVPEKQIVDALKT
YQPEPMSTEIWKSQNGATFINETYCEDPQSLDCALRRFDFHSPKGKKTLLFSGIKQNDPA
LDARIGEAIGNSMPDTLMLIEPSFQLEHAVKTIAPQTAIRHFSTVEAALKDHAGSMRPED
ILIVKGKKKLPFDQLTQTVQGSIFSNQCRINLAAIASNIKQIRSRLTPHTEIMAMVKATA
YGTQDALMAKFLKTEGIRRLGVSYIDEGISLRKEGVDQDIFVLNAAPYEIEKAVSWQFEI
AVNDKETIDQIGRMSSERGTITRVHLHINTGMSRLGCRPEEALPLARIIQAHPHLKLEGV
MTHFACSDNPDEDTFTLEQSRIFDHSIEAIEQEGISIPFRHACNSAAALRLHFPQYNIVR
IGMALYGLCPGGTLALSLHSRIVGINHCIKGETISYGRSYTVQREREKIAVIPIGYYDGL
HLNYSSKGKVMIHGAEAPIVGRICMDYMMVDITHIPDACIGDPVLIFGEDAEGNVLSPNE
LAEQGNSSVYELISCLGPRIQRVFIHEENDKIM
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatttgatctaagaaactggtccggattcatttctgccggaggggactccaac
agaccggctttgattgatcaaattgtcattgacacgagaaggatttacgcctcaaacgcg
ttgtttgcagctttaaaagggcaacgtcaagacggacatagttttgtttccggaagcggc
gctaaattcgctttagtagaaaaacactgggaggggccagcagacggtccctctcttctc
aaagtggacgatccgctcacagcttttcaagagattgccggcagctaccgctctcagctt
agagggaatgtaatcgcagtcatcggatcctacggaaaaacaatggttaaggatctgctg
cgccacctactatcttcctcatttactgttgcttcatctccggaaagcttcaacagccaa
gtcggcgttccgttaagcttgctaggtgcggcaaaggcgcatgagcaggtcatcattgaa
gcaggattttcccatcctggagagatggcaagactatgcaaaatcatccgtccctcccat
atcatcctcacccatgtaggcaacaagcatctgcacacaatcggctccaaagaacagatt
gctcaggaaatgtgtcatttttccctttcctcggatgcatcctggaccttattaccaaaa
gatccgatccttagtcctcttccaaagccctactactgggacacccctcagcctaacctg
cctcatgcttcttttcacgaaaacagcaaagcgatcaccgtgcagtttcctaaaggagat
gcccatacgatcttgcggccgcttgggatgagctatatcctcgatctgatcaatatcgga
ttaaaagcagcttaccttttgggagttcctgagaaacagatcgttgatgctttgaaaact
tatcagcctgagccaatgagcactgaaatttggaagtctcaaaacggcgcgaccttcatc
aacgagacttactgtgaagatccgcaaagcctggactgtgcattgcgccgctttgatttt
cactctccgaaaggaaaaaaaacgcttctatttagcggtatcaaacagaatgatcccgca
cttgatgccagaattggagaggcaatcggaaattccatgcctgatactttgatgttaatc
gaaccttccttccagctagagcatgcagtgaaaacaattgcgcctcaaacagccatccgc
catttttccaccgttgaggcagctttgaaggatcatgccggatcgatgaggcctgaagac
attctgatcgtcaaaggaaaaaagaagctgccgttcgatcaactgacacaaacagtgcaa
ggcagcattttttctaaccagtgccgcattaatctagcggcgattgcatccaatatcaag
cagatccgttcccgcttgactcctcatacggaaatcatggcgatggtcaaagctacagct
tatggaacgcaagacgcccttatggccaaattcttaaaaacagaagggatccgacggctg
ggagtctcttatattgatgaaggaatttctctcaggaaagaaggggtggatcaagacatt
tttgtgttgaacgcagcgccctacgaaattgaaaaagctgtaagctggcagtttgaaatt
gccgttaatgataaggagaccattgatcagattgggcgcatgtcttcagagaggggcacc
atcacgcgcgttcacctgcatattaacactggaatgagcaggttgggttgcagacctgag
gaagcacttccattggccagaatcattcaagcgcaccctcacttaaaactcgaaggtgtc
atgactcatttcgcttgctccgacaatcctgatgaggacactttcactttagagcaatcc
cgcatcttcgaccactccatcgaagcgattgaacaggaaggaatttcgatcccttttcgc
catgcatgcaactcagcagctgctttgaggctccattttcctcaatacaacatagtcaga
atcgggatggctctttatggcctttgtcctggaggaacccttgctctttccttgcattcc
cgtattgtgggcatcaaccactgtattaaaggggagacgatcagctatggccgcagctat
acagtacaaagggaaagagagaagattgccgtgatccccattgggtactatgacgggctt
cacttaaattacagcagcaaaggaaaagtgatgatccatggggcggaagctcccatcgtc
ggcaggatctgcatggactacatgatggttgacatcacacacattccagacgcttgcatc
ggtgatcccgttctcatcttcggcgaagatgccgaagggaacgttttatctcccaatgag
ttagccgagcaggggaactcatccgtctacgaattgatctcctgtctcggcccgcggata
caacgcgtatttattcatgaagagaacgataaaatcatgtaa
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