Wallemia ichthyophaga: J056_002367
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Entry
J056_002367 CDS
T03457
Name
(RefSeq) putative DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J056_002367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_002367
Enzymes [BR:
wic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J056_002367
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
J056_002367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
20375319
NCBI-ProteinID:
XP_009269907
UniProt:
R9AAU1
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MSFHTLEREKKFTNPSAKGNNYPILQELVKPHVDSFNMLFKDSNGDEGLLDKALRDIPSR
VVIDDKHRLELTYKQLNIAKPMVLDKDKNSLDRRVFPFEARERLTTYKSRMSVKIQLKVD
GQVKTEFIRECGSVPVMVRSERCNLQKMSSAELVAKHEESDEMGGYFIINGNEKLMRLLV
VPRRHYVTSIIRPSFANRGPTYTEFGVQIRCVRPDQTSTTNTMHYLSNGGATLRFAWRKN
EYMIPVIMVMKALSSASDRDIFEGIIQKDYDNTFLTDRVELLLRGFKPFRLYTKDQCLFY
LGSKFRVVLGCPDDWSDIQVGQHLIERCILVHLKTPEDKYRMLLFMLQKLYSLVSGESCA
DNPDSPQLHEVLMPGFLYGQIIKEKLDECLIAASAQIRQDLRRQVSSTNLSDDKYVNKVI
QRTNFDIGQKLNYFLATGNLVSPSGLDLQQATGFTIMAEKLNFYRYLSHFRCIHRGAFFA
ELKTTAVRKLLPEAWGFLCPVHTPDGAPCGLLNHLSRSCKVTTENLEESASKIPALLSGL
GMIQPFIFTVDRRTHVAIHLDGRVIGWANTSDVKHMAEALRIWKTEGLHDVPLNMEIGLV
PSSKGGQYPGLYLFTSRARMMRPVKYLANGKLDHLGSFEQVYMDVACVPKEIEKGISTHV
EFTPTNVLSVVANMTPFSDFNQSPRNMYQCQMAKQTMGTPSTAIMRRTDNKLYRIQNGQS
PIVRPNLHNNYGMDNFPQGANAIVAVLSYTGYDMEDAMIINKSAHERGFGYGTVYKSQIV
DLREMRGANKSKSTPSLHFGLGADAKREWRETLDDDGIVPSGVKVTSGDPICAYIDETTQ
RTMVEKYKGDEDAYIDEIRLLGSDGGDSELQKIHFKIRIPRSPVVGDKFSSRHGQKGVMS
QRWKKIDLPFSESGLQPDVIINPHAFPSRMTIGMFVESIAGKAGALHGLAQDGTPFNFNE
SDTPVEYFGDQLKAAGYNYHGNEPMYSGVTGEEFPADIYLGCVYYQRLRHMVNDKYQVRT
LGPVDQLTRQPIKGRKRHGGIRLGEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRDCG
SLISLGYTDERDTRASQLPQGPTGEYCRVCRQAQQEEDKGEMDGEATQVKRKSDIILPLS
KELNIGKGGNMDVVAVPYVLRYLASELACMGIRMSIELS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcacacgctcgagagggaaaagaaattcacaaatccctcggcgaaagggaat
aattatccaattctgcaggagctggtaaagcctcacgtagacagcttcaatatgctcttc
aaggattcaaatggcgatgaaggactgctcgataaagctcttagagatattccttctaga
gttgtcatcgatgataaacacaggcttgaattgacttataagcaattaaacattgccaaa
cctatggtactcgataaagataagaattctttagatagacgagttttcccattcgaggca
agagagagactcacaacctacaaatcacgtatgagcgttaaaattcaactcaaggttgat
ggtcaagtaaagacagagttcattagagagtgcggatcagttcctgtcatggttagatca
gaaagatgcaatttgcagaaaatgtcctcagcagaattagtagcaaagcacgaagaatca
gatgaaatgggcggttatttcattattaacggtaatgaaaagttaatgagattgctcgtc
gttccgagaagacattacgtaacttcaatcattagacctagtttcgctaatagaggccca
acatacaccgaatttggtgtacagattcgttgcgttagacctgatcaaacttcaacaaca
aatactatgcattatctcagtaatggtggcgctactctcagatttgcatggagaaagaac
gaatacatgattccagttatcatggtcatgaaagcactcagctctgcttctgatagggat
atttttgaaggaatcattcaaaaagactacgataacactttcttgactgatcgtgttgaa
cttttgttaagaggattcaagccattcagactatacaccaaagatcaatgcttgttctac
ttaggatctaagtttagagtcgtattgggctgtccagatgattggtccgatattcaagtt
ggtcaacacctcattgagagatgtatcctcgtccaccttaaaacacctgaagacaagtat
agaatgttgcttttcatgctacaaaagctctactccctagtcagtggtgaaagttgcgca
gataatccagattcccctcaactacacgaagtactcatgcctggctttttgtatggtcaa
ataataaaggagaagttggatgagtgtttaatagctgcctctgctcagattagacaagac
ctcagacgacaagttagctcgaccaatttaagcgacgacaagtatgtcaacaaagtcata
cagagaacgaactttgatattggacaaaaacttaattactttttagctactggtaatctt
gtttcaccatctggtttagatttacaacaagctactggtttcacaatcatggctgaaaag
ctcaacttctacagatatctctcacactttagatgtatacatagaggtgctttctttgct
gaattaaagacaacagctgttagaaagctccttcctgaggcttggggattcttgtgtcca
gtacacacaccagatggtgctccatgtggtcttcttaaccatctttccagatcgtgtaaa
gttacaaccgaaaacctggaagaaagtgcatctaaaatcccagcactgctctcaggtttg
ggtatgattcagccatttatattcacagttgatagaagaacacacgtcgctatacatctt
gacggtagagtgattggatgggccaacacttcagacgtcaagcacatggcagaggccctg
cgtatctggaagactgaaggattacatgacgtgccgttgaatatggaaattggtttagta
ccatcgtctaaaggaggtcaatatccaggtctctacctgttcacctcaagagctagaatg
atgagaccggttaagtaccttgccaacggtaaattagatcacttgggttcattcgaacag
gtttacatggacgtcgcttgtgttccaaaagagattgagaagggaatatctacacatgtt
gaatttacaccaacgaacgttttatcggttgtcgcaaatatgacaccgttctccgatttc
aatcaatcaccaagaaacatgtaccaatgccagatggctaagcaaacaatgggtacacct
tcaacagctataatgagaagaacggataacaagttatatagaattcaaaacggtcaatca
ccaatcgttaggccaaacctgcacaacaattacggtatggataatttccctcaaggtgct
aatgcaattgttgccgtattgtcgtataccggttacgatatggaggatgctatgataatc
aataagtcagcacatgaaagaggatttggttatggtacagtgtacaaatctcaaattgtg
gatctccgtgagatgagaggagcaaacaaatcaaagtcaacaccaagtctgcactttggt
ttgggtgctgacgcaaagagggaatggagagaaacgcttgacgacgatggtatagtgcca
tccggcgtcaaagtaacttccggcgatccaatttgcgcgtacatagatgaaaccacacag
agaacaatggttgagaaatataaaggagatgaagatgcctacattgacgaaattcgtttg
ctgggttcagacggtggtgactctgagttgcaaaagattcactttaagatccgtatacct
agatcacctgttgttggtgataagttcagttctagacatggacaaaagggtgttatgtca
cagagatggaagaagattgacctgccattctcagaatcaggtttgcagccagacgttatc
attaatcctcacgctttcccatctagaatgaccattggtatgtttgtagagtccatcgca
ggtaaggctggtgcattgcacggtttggcgcaggatggtacgccatttaacttcaacgaa
agcgatacgcctgtcgagtactttggtgatcagctgaaggctgctgggtacaattatcac
ggaaacgaaccaatgtattccggtgtaactggtgaagaattccctgctgatatatatctt
ggatgtgtttactaccaaagattgagacacatggttaatgacaagtatcaagttagaacg
ctcgggccggttgatcagctcacacgtcagccaattaagggacgtaagcgtcacggtggt
attagattgggagaaatggagagagatgcgcttattgctcatggtacatctttcttgctg
caagacagattgatgaattgctccgactactcaacagcatgggtatgcagagactgcggt
agtttaatttcactaggatacacggatgagagagacacaagagcgtcacaacttcctcaa
ggaccaactggagagtattgtcgcgtatgtcgtcaagctcaacaggaggaggacaaggga
gaaatggatggcgaggcaactcaagtgaagagaaaaagtgatatcatactgccattgtcg
aaggagttgaacattggcaaaggtggtaacatggacgtagtagcagttccatacgtgttg
aggtatctagcgtcggaacttgcatgtatgggtattagaatgtcaatagagctttcttga
DBGET
integrated database retrieval system