Wallemia ichthyophaga: J056_003723
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Entry
J056_003723 CDS
T03457
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
wic
Wallemia ichthyophaga
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wic03009
]
J056_003723
Ribosome biogenesis [BR:
wic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
J056_003723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20_C
Condensin2nSMC
DUF2420
Motif
Other DBs
NCBI-GeneID:
20376675
NCBI-ProteinID:
XP_009267214
UniProt:
R9AIK7
LinkDB
All DBs
Position
Unknown
AA seq
2601 aa
AA seq
DB search
MKRSLNPSNSNKRYKFENLNKKFNNINIKQILLKSLNDLDYTDDSDHNPFHTRLQQISEI
NLHYGFTSLYKEIYPLTHSLEQVIHFKSKIISSISYHLSVKFGDDPWRSWIGILDLIPPL
ARSLSSLLHPHLDQILPILLSIPTSDIAHNNPQLLEKSYVVLANLLSHLSKHLLKNNAAI
DIYNILIPFITNTSEHAKWIAQAWSAFLRRCKGPPLDSLLTHMLQSTSNSPLLEESIAIS
ISEAIQSPNYSLHSRTHSIFSFILNYSLENPSSSSTSITIRVLIAAIHHIRDPAQLNPIS
DVIVNALDQNTNQSNNVSSLSVAMRFAQVLMGVRKATRVDESSRRSVFKLLLTLSNKSLQ
SSTFIQYLQLLATALCAGKLQDLLSPGIQILDKVFSHNDKSSVLGFCMALSELQWSGIEQ
FILPPMSKTSFADNQYEFYTLLATLAERAQLPLTSTVAQQRFQAFFRTINKDLCKCVQDA
AARIVSNTSTDAHIDLLSNVAILVHANVGVEAKQFSGEIMNLFDYLTSASTDVNVQHEFS
HHPYNKVWLTSVTISIIAKLGKEDTVRERINDIVLRYSNYAMIVRSLSQLCEQGVSPTLS
TDAINLLKINILSYSTELRVSSLKLLSQLRGEQEVIYDKCFQVDQVPLTIESSRDRNLTL
RRVGQHLLAADASEESRKVGAMFMLSQFKVNFRPLYEQASDSLAELMAAQTGLLWPIFLP
ELEYAVGASQRSNASAQAPIWMLSDQAFKRSDRGVLIAGDYVTDDNHFRCTNLDKWDRGL
ENAFNDLSKPLRRAAEAQKSLNRFDINNYEELLLETLTKCVGVAERNTKTLNVLFLRFAD
RSEELDDDDEKEHQSLKMLRSRLSAWLKLYSAFNNPKAMYRAGDMHALFLEYLSKGDAGI
QGHALNCILTWKDLSVNAYEETLKNLLKEGTFRDELTNLPLNIESSAISPSHRAGLIPIV
IRMLYGVMTWRKGRSSGNQGAGVRRVAVLTALSECLPEELSTLIKLMTSSLQNAIPAVGE
ELQLKDLDAPPAGKRQIGFLSLLEDLLKYMGKSLIAYWPTLLGLTLELTHDAHRRIAAHK
ESDMDVDVVGVDSQVAHHTPLRNVRLLGLKRLGDFFRVPSIEFDFDPYLKSAFKSFISPR
LKLLAVENTQAPSSLLELFAVWSDSAAYIPSLQKYDSRLLPQAFSIITANNVKPAVVLRV
FDIVDNLIEVSASDEVGDETDESRALRTVVREEILKPNVHHLLVCLTDRFDKFGNSGVRD
DISKRQIGILSHIAKYVHDQDQARRVLDLLQPLLRQSYKVVNEKIKTELLSIYAELLKLV
PEFQDPTSLFHTRNFGLFASLFSLLRSRPARDELVKIMGVFSLVDTSFMRTFDLVTSLNS
WSSKRIGEPDFDRRLAAFAALESESGGLQGRDWSVVLHNMLYFIGDPEEMSIRSSASNVM
KVFVHVVGDKGGDELEELLLRMLYPGLRRILKSRHELVRVEVLSVIAKAVFVCDKMDTFT
QMRPLLMEGDEEANFFNNIHHVQLHRRSRALQRLGDFAMQGKLPNDALVKVFIPIVGHFV
SGATEKKDHNLTTEAIKALGACSSRLGWSAYNNLVRSYLKLAKAKDANEKVYIRATMSVL
EHFHFSMSEEVSGDYEENDEENESDDEDAPPQQASAAKVSDAVTNRLLPLLLKYLEQKDE
TEASIRIPIAAGYVRVALFLPAEVKEMEVNRLITVLAQVFKSKDSDTRVLAREVLCRIST
IVGPDYLPSIISALKEALTRGAQLHVLSYTVHSVIVHLIGSEAGRYDNLDLVSQDIVSII
TETIFGRSAKDAQNEEWKTQTKEVKSAKNKSLDTYQILARLCSPSKMPVLLLPIRDMITV
SANQKTIASVDEVLRRISLGVISNAQFQPTDVLSLCYSLIAQKSKFATPSEKKNRKRENV
KQGAVVQLKRDIREERNYFEQNSHKFINLGLDLFNTSFKRSQFDFKSGEHLARLDPLVSA
VGNVLYTSNTDTVVLGLKATANVARAPLPSIENSLGVFIKRIFALLDDCGGTQSELAQTT
LRTLAVLLREVKNATIKEEELKHLLNLIKPDLEEHDRQHTLFILLKAIVNRKLIVPEIYE
MMERVAEVMVTNQSSHVRDQCRNIYLQFLLDYPQGKARIKKVFDFLAKNLSYVYESGRLS
VMELLSVIIQKFDQENLRKNSDIVFLGLVMVLANDDSAVCKESANALIKSLLSIYDKDER
NKVVAMMHSWSTQDAQPSLQMLSAQLAGIFVESIEKGNGKGYVNGIITDLMRLIGVDEWQ
VLYHTLNAIIKVINTYPHAVDYVEWAAVVNSLNYQHVWVRSQSAKLVSALFTITQPYTPK
LGTGGMLSLEGLVELSRKFSYELRSKHLDNDMAHQVVKNLIFISRCFAGVSVENEDGNGE
KAVKAAEEGEKEEDDDEDGKKEEEVEKAEESWRRDPLGWLFRKLSFQARLSFFKRSFEDN
VQDKKLWIMQPTFICHWMGYMVNTLDKDRLTGYMYQILHPLVRITGEENFKRDAQLEELQ
NLAQEVMNMLQTKLDNTLYLRVYQGIRQRMVAVRDERKTVRKQNMVRNPQLAAHQKSKRS
ASKVDSKKRKNNHFASQKRTI
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaagtctaaacccttcaaattcaaataaaaggtataaatttgagaatttaaat
aaaaaattcaacaacatcaatattaagcagattcttcttaaatctttgaacgatttggat
tacactgatgacagcgatcacaacccttttcacactcgattacagcagatttctgaaatt
aacttgcactacggcttcacttccttatacaaagaaatctaccctctcactcactcccta
gaacaagttattcactttaaatcaaaaattatatcctccatctcttatcatttatctgtt
aaattcggtgatgatccgtggagatcttggattggtatcttggatttgatacctcctttg
gctagatctttgtcctctcttttacaccctcaccttgatcagattctccctattctcctc
tccatcccaacatctgacatagcccacaacaatcctcaacttttagaaaagagttacgtc
gttttggcaaacctcttgtctcacctatctaaacacctcttaaagaacaatgccgcaatt
gatatctacaacattctcatccctttcatcacaaacacctctgaacacgccaaatggatt
gctcaagcttggtctgcttttttgaggaggtgtaaaggtccaccgcttgactctttatta
actcacatgttgcaatctacttcaaattctcctctacttgaagaatccatcgccatttcc
atctctgaagctatccaatccccgaattactctctacattcacgcacacactccattttt
tcctttatcctcaattattcccttgaaaacccctcctcatcctccactagcattactatt
cgcgttttaattgcagctatccaccacataagagatcctgctcaattgaatcccatttct
gatgtcattgtcaatgcactagaccaaaacaccaatcaatccaacaatgtcagcagcctc
tcagttgcaatgcggtttgctcaggttttaatgggtgtacgcaaggctacacgagttgat
gaatcttcgcgccgttcagtcttcaaactcctcctcacattgtccaataaatcgcttcaa
tcctccacttttatccaatatttacagcttttggctaccgctttatgtgcaggcaagctt
caagaccttcttagcccgggtattcaaattctcgataaggtcttctctcacaatgacaaa
tcgtccgtactaggtttctgcatggcattgtcagagttacagtggtcaggtatcgagcag
tttatactcccgcccatgtcaaaaacatcatttgctgacaatcaatacgagttttacacc
ctcctcgcaactttggctgaacgtgcgcagttacctttaacaagcacagtcgcacagcag
cgtttccaggctttcttcagaaccatcaacaaggatttgtgcaaatgcgttcaagatgct
gccgctcgtatcgtcagcaacacttctaccgacgcgcatatcgatctcttgtccaatgtc
gccatactcgtccacgctaatgtcggtgttgaagctaagcagttctctggggaaattatg
aacctcttcgattacctcactagtgctagcactgatgtcaacgtgcagcatgagttttcc
caccatccttacaacaaagtttggctgacgtcggtcactatttcaatcattgcaaaatta
ggaaaggaggacacagttagggagcgtatcaacgatatcgtgttgcgttactccaattac
gcaatgatagtaaggtctttgtcacagttatgcgagcagggtgtctcaccgacgctgtca
accgatgcaatcaatctcctcaaaataaacatcctttcatactcaaccgagctcagagtg
tcatcactgaagctactcagtcagctcagaggcgagcaagaagtcatttacgacaagtgc
ttccaagtcgaccaagttccgcttactattgagagttcccgcgatcgcaacctcacactg
cgacgcgtcggccagcatctcttagctgctgatgccagtgaagagagtcgcaaagttggt
gctatgtttatgttatcgcaattcaaagttaatttccgtcctttatacgaacaagcctct
gattccctcgctgagttgatggcagcacagacaggattgttgtggcctatctttctccca
gagttggaatacgcagtaggtgcatctcagagaagcaatgcgagtgcgcaggcgcctatt
tggatgctcagtgaccaagctttcaagaggagtgaccggggtgtactcatagcgggcgac
tacgtcactgatgataatcatttcagatgtaccaatctcgataaatgggacaggggactt
gagaatgcattcaatgatctcagcaaacctctaaggagagcggcggaggctcaaaaatcg
ctcaatcgatttgatatcaacaactacgaggagttgctgcttgaaactctcaccaaatgt
gtcggtgttgctgagcgcaacactaaaactctcaacgtccttttcttgcgcttcgctgac
aggagtgaggaactggacgacgacgatgagaaagagcatcagtcgctcaaaatgcttaga
agccgtctgagtgcgtggctgaagctctattcggcgttcaacaaccccaaagctatgtat
cgtgcgggagatatgcacgccctcttcctcgaatacctcagcaaaggtgatgcaggtata
cagggtcacgctctcaattgcatcctgacatggaaggatctttcagtgaatgcgtacgag
gaaacactcaagaatctcctgaaggagggtacatttagggacgagctgactaacctcccg
cttaatatcgagtcgagtgctattagtcctagtcatcgagcggggcttattccgatcgtt
attagaatgctctatggtgttatgacgtggcgcaaaggaaggagctcgggtaatcagggt
gctggtgttcgtagagtggctgttctaaccgctttgagcgaatgtctcccagaggagctc
agcacgctcattaaactcatgacaagctccctccagaatgcaattcctgccgtaggtgaa
gagttgcagcttaaagatctggacgccccgccagctggtaaacgtcaaatcggtttccta
agtctccttgaagacctgctcaaatatatgggcaaatcgctcatcgcctattggcccact
ctgcttggattgaccttggagttgacgcacgacgcccacagacggatagctgcgcataag
gaatctgatatggacgtggatgtagtgggcgtggatagccaggtggcgcatcacacaccc
ttgcgtaatgttagactgctgggtcttaaaaggttgggagacttcttccgcgtcccgtct
atcgaattcgattttgatccttatctcaaatctgcattcaaatcgtttatctcgccgaga
ttgaagctgctcgctgtcgaaaacacccaggcaccctcatcgttgttagagctgtttgct
gtttggtcagactccgctgcgtatattccgtctttgcagaagtacgacagcagactgcta
cctcaagccttctcgattatcactgcaaacaacgtcaaacctgctgttgtattgcgagtg
ttcgatatagtcgataatttgatcgaggtgtccgcttcagatgaggtgggagacgagacg
gatgaaagcagggcgttgagaacggtcgtgagggaggagattctcaaacctaacgtacac
catctgttggtgtgcctcactgacaggtttgacaagttcggtaacagcggtgtgcgtgac
gacatatcgaagcgtcaaataggaatattgtctcatatcgccaagtatgtgcatgatcaa
gatcaagctaggagagtgctggatttgctgcaaccgctcctcagacagtcttacaaagtt
gtgaatgagaagatcaagacggagttgctatctatttatgcggaactgttgaaacttgtc
ccagaatttcaagaccctacttcacttttccatacgaggaacttcggtctgttcgcttca
ctcttttcactcctcagatcgcgaccagctagggatgagttggtcaagattatgggcgtg
tttagcttggttgacacgtcttttatgcgcactttcgaccttgttactagtctcaacagc
tggtcaagcaaacgtatcggcgagccagatttcgatagacgtttggctgcgtttgcagcg
ctcgaaagtgagagtggagggttacaaggcagagattggtctgttgttttgcacaatatg
ctctatttcataggcgatcctgaagagatgtctataaggtcctcagcttctaatgtcatg
aaagtgtttgtgcatgttgttggtgataagggtggcgacgagctggaggagctgcttcta
aggatgctctaccccggcctgcgtaggattctcaaatccagacacgagctagtgcgtgtc
gaggtactctctgtcatcgctaaggccgtctttgtgtgcgacaaaatggacactttcacg
caaatgcgtcctttgctgatggagggcgacgaggaggccaacttttttaacaacattcat
cacgtgcagctgcacagaagaagcagagctctgcagcgtctcggcgactttgcaatgcag
ggaaaattaccaaatgatgcgcttgtgaaggtgttcataccgattgttggccatttcgtc
tctggcgccacggagaagaaagatcacaatctcaccaccgaggctatcaaagctctcggt
gcatgctcgagcagactggggtggagtgcttacaacaatctcgttcgctcatatctcaag
ctcgccaaagccaaggacgccaacgaaaaagtgtacatcagagctactatgagcgttctt
gagcacttccatttcagcatgtcggaagaagtcagtggcgactatgaggagaatgatgag
gagaatgagagtgatgacgaagatgcacctccacagcaagctagtgcggctaaggtttct
gacgcagtcactaacagactcctccctcttctccttaaatatctcgagcagaaggatgag
acggaagcgagcatccgtatcccgattgcagctggttacgtgcgcgtcgctctctttctg
cctgccgaggtgaaagagatggaagtaaacaggttaattactgtccttgctcaggtgttc
aaaagtaaggacagcgatacgcgtgtgctggcaagagaggttttgtgcaggatcagcaca
atagttgggccagactatctcccatccattatttccgctcttaaggaggcacttacgcgt
ggtgctcagctgcatgtgttgtcgtacactgtacattcggtcattgttcacctcattggt
tctgaggctggtcggtatgataatctcgatctggtctcacaggacatagtgtcgattatc
acagaaacaatatttgggcgctcagcgaaagatgcgcagaacgaggaatggaagacacag
acgaaggaggttaagtcagccaagaacaagtcactcgacacgtatcagatcctcgccagg
ctttgctcaccaagtaagatgccagtgctgttgctgcccattcgcgatatgatcactgtg
tcggcaaaccagaagactattgcgtcagttgatgaagtacttcgcagaattagcttgggc
gttatatccaacgcgcaattccaaccaacggacgttctctcgctgtgctacagtctcatc
gctcaaaagagcaaattcgccacaccgtccgagaagaagaataggaagcgggagaatgtt
aaacaaggtgcggtagtgcagctgaagcgggatattcgtgaagagcgcaactactttgaa
cagaactcgcacaaatttatcaatctaggtttagatctcttcaacacgtcttttaaacgt
tcacaatttgactttaagagtggagagcatctcgcgcgtctcgatccgcttgtgagcgca
gtgggtaatgtgctctatacgtccaacacggatactgtcgttttgggcttgaaggccact
gccaatgtagcgagggcgccgctgccgtcgattgagaatagcttgggtgtgttcatcaag
cggatttttgcattgttggacgattgcgggggaacacaatcagaactcgcacaaactacg
ctgcgcactcttgcagtattgctgcgtgaagtgaagaatgctacgatcaaggaggaggag
cttaagcatctactcaacctcattaagcccgatctcgaggaacatgaccgccagcacacg
ttattcattctccttaaagccatcgttaacaggaagctgatcgtgccggagatatacgaa
atgatggagcgcgtggctgaggttatggtcactaatcagtcttcccacgtcagagatcaa
tgccggaatatttatttacaattcttgctcgattatccacaaggcaaggcgcgcattaag
aaggtgttcgacttcctagccaagaatctcagctacgtgtatgagtcggggagattgtca
gtaatggaattgctttcggttattattcagaaattcgatcaagagaatttgaggaagaat
tcggatatcgtttttctaggactagtgatggtacttgccaatgatgattcagccgtgtgc
aaggagagcgccaatgcactaatcaagagcctgctatcgatttacgataaagatgaaaga
aacaaggtggtggctatgatgcacagctggtctactcaggatgctcaacctagtttgcag
atgctatctgcgcagctcgccggtatctttgttgagtcgatcgagaaaggtaacggaaag
ggttatgtgaacggaataattacagatttgatgcggttaattggggtggatgaatggcaa
gtgctgtaccacaccctcaacgccataatcaaggtaatcaacacataccctcacgcggtg
gattatgtagagtgggctgctgtcgtgaatagtctcaattatcagcatgtgtgggtgcgc
tcccagtcagcaaagctggttagtgcccttttcacaatcacacagccttacacacctaaa
ctgggaacgggcggcatgttgtcgctcgaaggactagtcgagctgagtagaaaattctca
tacgagctccggtcgaagcatctggacaatgacatggcgcaccaggttgtgaaaaacctc
atctttatttccagatgtttcgctggtgtgtccgtggaaaatgaggatgggaatggagaa
aaggctgtcaaggcagctgaagagggtgagaaagaggaggatgacgatgaggatgggaag
aaagaggaggaggtagaaaaggcggaggagagttggaggcgcgacccactcggctggctc
ttccgtaaactgtccttccaagccaggttgtcattcttcaaacgctcattcgaggacaat
gtgcaagacaagaaattgtggatcatgcaacccactttcatctgccattggatgggatac
atggtaaacacactggataaagatcggttgacagggtacatgtatcagatacttcaccct
cttgtcagaatcactggggaagagaatttcaagagagatgcgcagttggaagagctgcag
aatttggcccaggaggtaatgaatatgctgcaaaccaagttagacaacacgctctatctg
cgcgtttatcagggtattaggcagcgcatggtggctgttagagacgagcgaaagacagta
cgcaagcagaatatggtcaggaatcctcaactggctgctcatcagaagagcaagcggtct
gcatccaaggtggattctaagaagaggaagaataatcactttgcatcacaaaagagaacg
atttag
DBGET
integrated database retrieval system
