Xanthomonas axonopodis pv. citrumelo F1: XACM_1076
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Entry
XACM_1076 CDS
T01616
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xax
Xanthomonas axonopodis pv. citrumelo F1
Pathway
xax03030
DNA replication
xax03430
Mismatch repair
xax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XACM_1076 (dnaX)
03430 Mismatch repair
XACM_1076 (dnaX)
03440 Homologous recombination
XACM_1076 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xax03032
]
XACM_1076 (dnaX)
03400 DNA repair and recombination proteins [BR:
xax03400
]
XACM_1076 (dnaX)
Enzymes [BR:
xax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XACM_1076 (dnaX)
DNA replication proteins [BR:
xax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XACM_1076 (dnaX)
DNA repair and recombination proteins [BR:
xax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XACM_1076 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
ResIII
PIF1
AAA_7
AAA_18
AAA_19
Mg_chelatase
nSTAND3
TsaE
AAA_24
AAA_2
DNA_pol3_delta
SKI
Motif
Other DBs
NCBI-ProteinID:
AEO41363
LinkDB
All DBs
Position
1187418..1189469
Genome browser
AA seq
683 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLLQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGATAGGGARSGAAGGQAAAPAAAAPAVVASPAAVTDTMPAAEASLPASA
TRATPISAAPPVVVLAPQESSPDSRASAASARNDDTPPWAVDDAPVRAQVAPAPDTMAVL
APEAAMAPPAATVELAHPDAIASDAVVEAPASVAVSSLVEPSSLEEPAVVAPSATAGAAS
GSATDATALLDDGRIADAEQWLELVTRSGLNGPSRQLAANAAFIGHRDGVLRLALAPGFE
YLNSERSIANLAQALAPVLGNPPRIVIETGSADVETLHERANRQKGERQSAAETAFMNDP
TVQLLIQQQGARIVPDSIRPYDE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacctcgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgtggcgtgggcaagaccaccatcgcgcgcatcttcgccaaa
tcgctcaattgcgagaccggcaccagtgccgatccctgcgggacgtgcccggcctgcctg
gacatcgacgccgggcgctacatcgacctgttggagatcgatgccgcatccaacaccggc
gtggacgatgtgcgcgaggtgatcgaaaacgcgcagtacatgccctcgcgcggcaagttc
aaggtctatctgatcgacgaagtgcacatgctgtccaaggcggcgttcaacgcgctgctg
aagacgctggaagagccaccggagcacgtgaagttcctgctggccaccaccgacccgcaa
aaattgccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcgattggacgaa
gaccagattcaggggcagatgacgcgcatcctggccgctgaacagatcgagtcggatccg
tcggcgatcgtgcagctgtccaaggcggccgacggctcgctgcgcgatggtctgtcgctg
ctggaccaggccatcgcctatgccggcggcgcgctgcgcgaggatgtggtgcgcaccatg
ctgggtacggtcgatcgcacccaggtcggcgcgatgctgcagtcgcttgccgatggcgat
ggcgcgcgcctgttgcaggtggtggccgcgctggccgaattttcgcccgattggagcggt
gtgctggaggccctggccgaggccctgcaccgggtgcaggtgcagcagttggtgccatcg
gtggcctttgtcggcgacgggatcgacccgacgccgtttgcggcgcagctgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgacgcgacctgtatctggcgccc
agcccgcgcgccggtttcgaaatggcagtgctgcgcatgcttgccttccgccccgcagcg
gcggtgccggctggcggctcggacgacggtcgcggtgccacggcgggcggtggtgcgcgt
tctggcgctgccggcggtcaggctgctgcgccggcagcggcagcgcccgccgtagtggcc
tcgcctgctgcggtgacggatacgatgccggctgcggaagcgtccttgccggcatcagca
acccgggcaacgccgatttcggctgcgcctcccgttgtcgtgcttgccccccaagagtct
tctccggatagccgtgcgtctgcagccagtgcgcgtaatgacgacaccccgccgtgggca
gtggacgatgcgccggtgcgtgcgcaggtcgcgccggcacccgacacgatggccgtgctt
gcgcctgaagcggcgatggctccgccagctgccaccgtcgagctcgcgcaccccgatgcg
attgcgtccgacgctgtggtggaggctccggcttcggtcgcagtgtcgtcgcttgtcgag
ccctcgtcgcttgaggagccagcggtggtcgcgccatcggcaacggcaggggctgcatca
ggctcggcgaccgacgcgacggccctgctcgatgacggccgcatcgccgatgccgagcaa
tggctggagctggtcacgcgcagcggcttgaatggcccgtcgcggcagctggccgccaac
gccgcattcatcggccatcgcgatggcgtgctgcggctggcgctggcgcctggcttcgaa
tatctgaactccgagcgctccatcgccaacctcgcgcaggcgctggcaccggtgttggga
aacccgccgcgcatcgtcatcgaaaccggcagcgccgatgtcgaaaccttgcacgagcgt
gccaaccgccagaaaggcgagcgccagagcgcggccgaaacagccttcatgaacgacccg
acggtgcagttgctgatccagcagcaaggcgcgcggatcgtgcccgattccatccgccct
tacgacgagtaa
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