Xenorhabdus bovienii SS-2004: XBJ1_3470
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Entry
XBJ1_3470 CDS
T01186
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00540
Lipopolysaccharide biosynthesis
xbo01100
Metabolic pathways
Module
xbo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XBJ1_3470 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
XBJ1_3470 (lpxC)
Enzymes [BR:
xbo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
XBJ1_3470 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
Lipid A
XBJ1_3470 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
CBJ82588
UniProt:
D3V4K9
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All DBs
Position
complement(3378541..3379458)
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AA seq
305 aa
AA seq
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MIKQRTLKRTVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPANAKSVRDT
MLCTCLVNEHNVRISTVEHLNAALAGLGIDNIVIDVDAPEIPIMDGSASPFVFLLLDAGI
EELNVAKKFVRMKDAVRVEDGDKWAELAPYHGFSLDFTIDFNHPAIDSSSQRYSLDFSAD
SFVRQISRARTFGFMRDIEYLQSQGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGYNIIGAFTAFKSGHALNNKLLQAVLAHESAWEFVTFEDEAEMPLAFRAP
STVMA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacattaaaacggactgttcaagcgaccggcgttggtttgcacacc
ggtaaaaaagtcacgctgacaatgcgtccagcgccggctaataccggggtcatctatcgt
cgtactgatttgaatccaccggtagattttccggcgaatgctaaatccgtgcgtgatacc
atgctctgtacttgtctggtaaatgaacacaatgtgcgaatttcaaccgttgagcacttg
aacgcagcgttggcaggtctgggtatcgataacattgttattgacgtcgatgcaccagaa
atccctattatggatggtagtgccagcccgttcgtttttctgctgttggatgcaggtatt
gaagagctgaatgtcgcgaagaaattcgtacgtatgaaagacgcagttcgcgtagaagat
ggagataaatgggctgaattagcaccatatcacggttttagtctggactttaccattgac
ttcaaccatccggctattgattccagttcacaacgttatagtttggatttctctgcggat
tcgtttgtccgccagattagccgcgcacgtacttttggatttatgcgcgatattgagtac
ctgcaatcccagggcctgtgcctcggtggcagcttcgattgcgccattgtggtagatgac
taccgcgtactcaatgaagatggtctgcgttttgaagatgagttcgtccgtcataaaatg
ctggatgccatcggtgatctgttcatgtgtggttataacatcattggcgcgtttactgcg
ttcaaatcaggccatgcattgaataacaagttgctgcaagcagtcttggcgcatgaaagt
gcttgggaatttgtcacgtttgaagatgaggctgaaatgccgctggctttccgtgctcca
tcaacagtgatggcatag
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