Xenorhabdus bovienii SS-2004: XBJ1_3903
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Entry
XBJ1_3903 CDS
T01186
Symbol
uvrA
Name
(GenBank) DNA excision repair enzyme subunit, with UvrBC
KO
K03701
excinuclease ABC subunit A
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XBJ1_3903 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_3903 (uvrA)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XBJ1_3903 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XBJ1_3903 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_25
AAA_23
NACHT
APS_kinase
Viral_helicase1
cobW
ScfRs
Motif
Other DBs
NCBI-ProteinID:
CBJ83021
UniProt:
D3V5U2
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All DBs
Position
3780659..3783490
Genome browser
AA seq
943 aa
AA seq
DB search
MDNIEVRGARTHNLKNINLIIPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDIPLAAQTISQMVDNVLVLPEGQRLMLLAPVVKERKGEHTKLLDNLSAQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRADLAQRLAESFETALELSGGTAVIANMDDE
QAEELIFSANFACSVCGYSMSELEPRLFSFNNPAGACPTCDGLGVQQFFDPERVIQNGDI
SLAGGAIRGWDRRNFYYFQMLKSLSDHYKFDIEIPFNDLDPAIRKTVLYGSDKESIEFKY
TNDRGDTTVRHHPFEGVLHNMERRYKETESSAVREELAKYISNRSCISCDGTRLRKEARY
VFIESTTLPQISEFSIGHAMAFFQNIKLSGQRAQIAEKILKEIRDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLLHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGKIVAEGTIEDIMTNKESLTGKFLSGKCKIAI
PEQRVPANPDKVLELIGAKGNNLKKVTLKLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATNINPAPYLDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFSGVPE
SRARGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKSKRYNRETLEIKY
KGKNINEVLNMTIEEARKFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
SRELSKRGTGQTLYILDEPTTGLHFADIQQLLSVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGNGGGEILVSGTPEEVAQCEESHTARFLKPILERQ
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataacatcgaagttcggggcgcccgcacccataatctcaagaatatcaatctgata
attccccgtaacaaactgatagtcattacaggattatcaggctccggtaagtcgtcccta
gctttcgatacattatatgcggaaggtcaacgtcgttatgtggagtcactctctgcctat
gcacgccagtttttgtctctcatggaaaaaccggatgttgatcatatcgaaggcctctct
cccgccatttccattgaacagaaatcgacttcccataacccgcgttcaactgtcgggacg
attaccgaaattcacgattatctccgcctgctgtttgcacgcgtaggggaaccccgttgc
cccgatcatgatattccgctggctgcccaaactatcagccaaatggtggataatgtgctg
gtattaccggaaggccagcgtctgatgctgctggctcctgtcgtcaaagaacgcaaaggg
gagcacaccaagctgctggataacctgtccgcacaaggctacatccgcgcccgtattgat
ggagaagtgtgtgacctgtctgacccaccaaaacttgaattacaaaaaaaacacactatt
gaagtggtcgtcgatcgcttcaaagtccgcgctgatctggctcaacgactggcagaatca
ttcgaaaccgcgttagaactttccggcggaacggctgttattgccaatatggatgacgag
caggctgaggaattaatcttctccgctaattttgcctgttccgtctgtggttacagtatg
agtgaactggaaccacgcctgttttcctttaacaatcccgcaggtgcctgccctacttgt
gacggtttgggcgtccagcaatttttcgatcctgagcgagttatccagaatggcgatatt
tctctcgcgggtggtgcgatccgaggttgggatcgccgtaatttctattatttccagatg
cttaagtcattgtcagaccattataaatttgatatcgaaattccattcaatgacttagac
ccagccatcagaaaaacagttttatacggttcagacaaagaatccatcgagttcaaatac
accaatgatcggggcgataccacagttcgccatcatccgtttgaaggtgtgttgcacaat
atggagcgccgctataaagagaccgaatccagcgcagtgcgggaagaactggcaaaatat
atcagtaaccgttcctgcatctcctgtgatggaacccggctgcgcaaagaagcgcgttat
gtctttatcgaaagcaccacgctgccgcaaatctccgagttcagtattggtcatgcgatg
gcgtttttccaaaatatcaaactgagtgggcagcgcgcccaaattgctgaaaaaatcctg
aaagagatccgggaccgcctgaaatttctggtgaatgttggcttgaattacctgaccctt
tcccggtcagcggaaaccctttccggcggtgaagcacagcgtatccggctggccagccag
attggcgcgggtctggttggcgtcatgtatgtactggatgagccatctattggcctgcat
caacgtgataatgaacgtttactggaaaccttgctgcatctgcgcaatttggggaatacc
gtcatcgtagttgaacacgatgaagatgccattcgggcggcggatcatgtcattgatatc
gggccgggtgccggtgtgcatggcggcaaaattgttgccgaagggactattgaggatatc
atgaccaacaaggagtctctcactgggaaattcctgagcggtaaatgtaaaattgcaatc
cctgaacagcgtgttcctgccaatcccgataaagtactggaattgattggtgccaagggc
aataacctgaaaaaagtgacattaaaactgcctgtcggcttgttcacttgtgttacgggt
gtttcaggttccggaaaatcgactctgatcaacgatacactattcccaattgcgcaacgt
cagttaaatggagcgaccaatattaatccagcgccttaccttgatgttcaagggctggaa
cattttgataaggtcatcgatatcgaccaaagtccgatcggtagaacgccccgctccaac
cctgccacttatactggcgtgtttacgccagtgagggagttattttctggcgtgcctgaa
tcccgcgcccgtggctatacaccggggcgtttcagtttcaacgtcaagggcgggcgctgt
gaagcgtgtcagggtgatggcgtaattaaggttgaaatgcacttcctgcccgatgtttat
gtgccttgcgatcactgtaagagtaagcgctataaccgcgaaaccttggaaatcaaatat
aagggcaaaaatatcaatgaagtgctgaatatgaccattgaagaagcccgtaagtttttt
gatgcggttcctgctctcgccagaaaactgcaaaccttgatggatgtcggtctttcctat
attcgtctggggcaatcggcaaccacgctctcaggtggagaagcacaacgggtcaagctg
tcacgtgaattatccaaacgtggtacaggccagacgctgtatattcttgatgaaccaaca
actggcctgcatttcgccgatattcagcaattgctgtctgtcctgcatcaattacgtgat
cagggaaatactatcgtggtgattgagcataatctggatgttatcaaaaccgctgactgg
attgtcgatcttggccctgaaggtggcaacggtggcggtgaaatattagtgtcaggaaca
ccagaagaagtggctcaatgtgaagaatcccatacggcacggtttttgaaaccgatactt
gagcgtcaataa
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