KEGG   Xenorhabdus bovienii SS-2004: XBJ1_3903
Entry
XBJ1_3903         CDS       T01186                                 
Symbol
uvrA
Name
(GenBank) DNA excision repair enzyme subunit, with UvrBC
  KO
K03701  excinuclease ABC subunit A
Organism
xbo  Xenorhabdus bovienii SS-2004
Pathway
xbo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XBJ1_3903 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xbo03400]
    XBJ1_3903 (uvrA)
DNA repair and recombination proteins [BR:xbo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XBJ1_3903 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      XBJ1_3903 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 RsgA_GTPase DnaJ_CXXCXGXG nSTAND3 AAA_25 AAA_23 NACHT APS_kinase Viral_helicase1 cobW ScfRs
Other DBs
NCBI-ProteinID: CBJ83021
UniProt: D3V5U2
LinkDB
Position
3780659..3783490
AA seq 943 aa
MDNIEVRGARTHNLKNINLIIPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDIPLAAQTISQMVDNVLVLPEGQRLMLLAPVVKERKGEHTKLLDNLSAQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRADLAQRLAESFETALELSGGTAVIANMDDE
QAEELIFSANFACSVCGYSMSELEPRLFSFNNPAGACPTCDGLGVQQFFDPERVIQNGDI
SLAGGAIRGWDRRNFYYFQMLKSLSDHYKFDIEIPFNDLDPAIRKTVLYGSDKESIEFKY
TNDRGDTTVRHHPFEGVLHNMERRYKETESSAVREELAKYISNRSCISCDGTRLRKEARY
VFIESTTLPQISEFSIGHAMAFFQNIKLSGQRAQIAEKILKEIRDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLLHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGKIVAEGTIEDIMTNKESLTGKFLSGKCKIAI
PEQRVPANPDKVLELIGAKGNNLKKVTLKLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATNINPAPYLDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFSGVPE
SRARGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKSKRYNRETLEIKY
KGKNINEVLNMTIEEARKFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
SRELSKRGTGQTLYILDEPTTGLHFADIQQLLSVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGNGGGEILVSGTPEEVAQCEESHTARFLKPILERQ
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggataacatcgaagttcggggcgcccgcacccataatctcaagaatatcaatctgata
attccccgtaacaaactgatagtcattacaggattatcaggctccggtaagtcgtcccta
gctttcgatacattatatgcggaaggtcaacgtcgttatgtggagtcactctctgcctat
gcacgccagtttttgtctctcatggaaaaaccggatgttgatcatatcgaaggcctctct
cccgccatttccattgaacagaaatcgacttcccataacccgcgttcaactgtcgggacg
attaccgaaattcacgattatctccgcctgctgtttgcacgcgtaggggaaccccgttgc
cccgatcatgatattccgctggctgcccaaactatcagccaaatggtggataatgtgctg
gtattaccggaaggccagcgtctgatgctgctggctcctgtcgtcaaagaacgcaaaggg
gagcacaccaagctgctggataacctgtccgcacaaggctacatccgcgcccgtattgat
ggagaagtgtgtgacctgtctgacccaccaaaacttgaattacaaaaaaaacacactatt
gaagtggtcgtcgatcgcttcaaagtccgcgctgatctggctcaacgactggcagaatca
ttcgaaaccgcgttagaactttccggcggaacggctgttattgccaatatggatgacgag
caggctgaggaattaatcttctccgctaattttgcctgttccgtctgtggttacagtatg
agtgaactggaaccacgcctgttttcctttaacaatcccgcaggtgcctgccctacttgt
gacggtttgggcgtccagcaatttttcgatcctgagcgagttatccagaatggcgatatt
tctctcgcgggtggtgcgatccgaggttgggatcgccgtaatttctattatttccagatg
cttaagtcattgtcagaccattataaatttgatatcgaaattccattcaatgacttagac
ccagccatcagaaaaacagttttatacggttcagacaaagaatccatcgagttcaaatac
accaatgatcggggcgataccacagttcgccatcatccgtttgaaggtgtgttgcacaat
atggagcgccgctataaagagaccgaatccagcgcagtgcgggaagaactggcaaaatat
atcagtaaccgttcctgcatctcctgtgatggaacccggctgcgcaaagaagcgcgttat
gtctttatcgaaagcaccacgctgccgcaaatctccgagttcagtattggtcatgcgatg
gcgtttttccaaaatatcaaactgagtgggcagcgcgcccaaattgctgaaaaaatcctg
aaagagatccgggaccgcctgaaatttctggtgaatgttggcttgaattacctgaccctt
tcccggtcagcggaaaccctttccggcggtgaagcacagcgtatccggctggccagccag
attggcgcgggtctggttggcgtcatgtatgtactggatgagccatctattggcctgcat
caacgtgataatgaacgtttactggaaaccttgctgcatctgcgcaatttggggaatacc
gtcatcgtagttgaacacgatgaagatgccattcgggcggcggatcatgtcattgatatc
gggccgggtgccggtgtgcatggcggcaaaattgttgccgaagggactattgaggatatc
atgaccaacaaggagtctctcactgggaaattcctgagcggtaaatgtaaaattgcaatc
cctgaacagcgtgttcctgccaatcccgataaagtactggaattgattggtgccaagggc
aataacctgaaaaaagtgacattaaaactgcctgtcggcttgttcacttgtgttacgggt
gtttcaggttccggaaaatcgactctgatcaacgatacactattcccaattgcgcaacgt
cagttaaatggagcgaccaatattaatccagcgccttaccttgatgttcaagggctggaa
cattttgataaggtcatcgatatcgaccaaagtccgatcggtagaacgccccgctccaac
cctgccacttatactggcgtgtttacgccagtgagggagttattttctggcgtgcctgaa
tcccgcgcccgtggctatacaccggggcgtttcagtttcaacgtcaagggcgggcgctgt
gaagcgtgtcagggtgatggcgtaattaaggttgaaatgcacttcctgcccgatgtttat
gtgccttgcgatcactgtaagagtaagcgctataaccgcgaaaccttggaaatcaaatat
aagggcaaaaatatcaatgaagtgctgaatatgaccattgaagaagcccgtaagtttttt
gatgcggttcctgctctcgccagaaaactgcaaaccttgatggatgtcggtctttcctat
attcgtctggggcaatcggcaaccacgctctcaggtggagaagcacaacgggtcaagctg
tcacgtgaattatccaaacgtggtacaggccagacgctgtatattcttgatgaaccaaca
actggcctgcatttcgccgatattcagcaattgctgtctgtcctgcatcaattacgtgat
cagggaaatactatcgtggtgattgagcataatctggatgttatcaaaaccgctgactgg
attgtcgatcttggccctgaaggtggcaacggtggcggtgaaatattagtgtcaggaaca
ccagaagaagtggctcaatgtgaagaatcccatacggcacggtttttgaaaccgatactt
gagcgtcaataa

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