Xanthomonas campestris pv. campestris ATCC 33913: XCC0004
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Entry
XCC0004 CDS
T00083
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
xcc
Xanthomonas campestris pv. campestris ATCC 33913
Brite
KEGG Orthology (KO) [BR:
xcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcc03032
]
XCC0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
xcc03400
]
XCC0004 (gyrB)
Enzymes [BR:
xcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
XCC0004 (gyrB)
DNA replication proteins [BR:
xcc03032
]
Prokaryotic type
DNA Topoisomerases
XCC0004 (gyrB)
DNA repair and recombination proteins [BR:
xcc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XCC0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
SMC_hinge
Motif
Other DBs
NCBI-ProteinID:
AAM39323
UniProt:
Q8PEH2
LinkDB
All DBs
Position
4853..7297
Genome browser
AA seq
814 aa
AA seq
DB search
MTDEQTTPPTPNGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDE
ALAGHADDIVVKIHVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYK
VSGGLHGVGVSVVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFK
PAVEIFSDVEFHYDILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLA
QLKTPLHPNVISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALT
RVLSNYIEQNGIAKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVE
NAFGARLQEFLQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADC
QEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTL
ITALGTGIGRDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIG
LPPLYKLKQGKSELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGA
KEAIARNAHRYDPALLTALIDLPPLDVVQLQAEGDVHPTLDALQAVLNRGTLGTARYHLR
FDPATDSAAASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRG
NKSHPITSFAQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDA
VAADQIFSTLMGDVVEPRRDFIEDNALKVSNLDI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaacaaaccacaccgccaacacccaacggcacctacgactccagcaagatc
accgtgctgcgtggcctcgaagccgtccgcaagcgccccggaatgtacatcggcgatgtg
cacgacggcaccggcctgcaccacatggtgttcgaggtggtcgacaattcggtcgacgag
gccctggcgggccacgccgatgacatcgtggtcaagatccacgtggatggctcggtagcg
gtgtcggacaacggccgcggcgttccggtggacatccacaaggaagaaggcgtttccgca
gccgaggtgatcctcaccgtgctgcacgccggcggcaagttcgacgacaacagctacaaa
gtgtccggcggcctgcacggcgtgggcgtctcggtggtcaacgcgctgtccgagcacctg
tggctggatatctggcgcgacggcttccactaccagcaggaatatgcgctgggtgagccg
cagtacccgctcaagcagctggaagcctcgaccaagcgcggcaccacgctgcgcttcaag
ccggcggtggagatcttcagcgacgtcgagttccattacgacatcctggcgcgccgccta
cgcgagctttcgttcctcaactccggcgtcaagattgcgctgatcgacgagcgcggcgaa
ggccggcgcgacgatttccactacgaaggcggcattcgcagcttcgtggagcatctggcc
cagctcaagaccccgctgcacccgaacgtgatttcggtgaccggcgagcacaacggcatc
gtggtggacgtggccctgcaatggaccgacgcctaccaggaaaccatgtattgcttcacc
aataacatcccgcagaaggatggcggcacgcatctggccggcttccgcggcgcgttgacg
cgcgtgctgagcaactacatcgagcagaacggcatcgccaagcaggcaaagatcaccctg
accggcgacgacatgcgcgaaggcatgatcgcagtgctgtcggtgaaggtgcccgacccc
agcttctcctcgcagaccaaggaaaaactggtcagctcggacgtgcgcccggcggtggaa
aatgccttcggtgcgcgcctgcaggaattcctgcaggaaaatccgaacgaagccaaggcc
atcaccggcaagatcgtcgatgccgcccgtgcccgtgaagccgcccgcaaggcgcgcgat
ctgacccgccgcaagggcgcgctggatatcgccggcctgccgggcaagctggccgattgc
caggaaaaggatccggcgctgtccgagctgttcatcgtcgagggtgactcggcaggtggc
tcggccaagcagggccgcaaccgcaagaaccaggcggtgctgccgctgcgcggcaagatc
ctcaacgtcgaacgcgcgcgcttcgatcgcatgctggcctccgaccaggtgggcacgctg
atcaccgcgctgggcaccggcatcggccgcgacgagtacaacccggacaagctgcgctac
caccgcatcatcctgatgaccgacgccgacgtggacggctcgcacatccgcacgctgctg
ctcacgttcttctaccggcagatgccggagctgatcgagcgcggctacatctacatcggc
ctgccgccgctgtacaagctcaagcagggcaagagcgagctgtatctcaaggacgacgcc
gcgctcaacgcctacctggccagcagcgcggtcgaaggtgcagcgctgatcccggccagc
gacgagccgccgatcaccggcgaggcgctggaaaaactgctgctgttgttcgctggcgcc
aaggaggccattgcccgcaatgcccaccgctacgacccggcgctgttgaccgcgttgatc
gatctgccgccgctggacgtggtgcagctgcaggccgaaggcgacgtgcatcccacgctg
gatgcgctgcaggcagtgctcaatcgcggcaccctgggcacggcgcgctatcacctgcgc
ttcgacccggccaccgacagtgccgccgcctcgctggtgtcggtgcgcaagcacatgggc
gaggaattcacccaggtgctgccgatgggcgcgttcgaaagtggtgagctgcgtccgctg
cgcgaggttgcgctggccctgcatggcttggtgcgcgaaggcgcgcagatcctgcgtggc
aacaagagccacccgatcaccagctttgcgcaggcgcaggcctggctgctggaagaagct
aagcggggccgccaggtgcagcgcttcaagggcctgggcgaaatgaacgccgagcagttg
tgggaaaccacggtcaatccggacacgcggcgcctgctgcaggtgcgcattgaagacgcc
gtggcggccgaccagatcttcagcaccttgatgggcgatgtggtggaaccgcgccgcgac
ttcatcgaggacaacgcgctgaaggtttccaacctggatatctga
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integrated database retrieval system
