Xanthomonas citri subsp. citri Aw12879: XCAW_00539
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Entry
XCAW_00539 CDS
T02519
Name
(GenBank) Retron-type reverse transcriptase
Organism
xci
Xanthomonas citri subsp. citri Aw12879
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RepL
Motif
Other DBs
NCBI-ProteinID:
AGI06358
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Position
639218..640735
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AA seq
505 aa
AA seq
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MAILSEAALDFAKAHIEKYYDSDFFPKAFEFEALWHQWPQVKQELRSKNISKMLVSNPYN
STIQKARGGYRVVHQLEPMEAIAYTAMAYEVGGSIEAMRAPATHRIACSYRINIANGNFF
VGGSGWGDFKAKSQELANENKFAAITDISDFYNQIYLHRLQNAIEASGPAHKSLASDIED
FLLALNNKASQGVPVGPAASIVMAEAVLIDIDSFISQCGVLHTRYVDDIRIFSNSAAKLA
ETLEKLTLYLYENHRLTLATDKTKLMPSEDFIENHLHNPYLDDKDELMEELDNISPYGGE
DEDEDEGLDDDDIGETLAGALYKILEFDYIDLGLARSIIRTARRNKIPNIITILLENFEY
FAPVTPDIFLYLEELFDASTAAIIRAKLEKVCDMQEANCALVRIWLEHFIASHSSLLANQ
KLRIFVMTGPNIENKARAAITLGDIAWVRTHKGQIYNVGARARRSIINSARVLPSDERNP
WLTLVAQNAALPLERWLAGWVKETA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcaattctttcagaagcagcgctcgatttcgccaaggcacatatcgagaagtactac
gactccgactttttcccaaaggctttcgaattcgaggcgctctggcatcaatggccccaa
gtcaagcaggagctgcgaagcaagaacatttcaaaaatgttggtttccaatccttataac
tcgaccatacaaaaagcacgcggtggataccgagtagtccatcagttggagccaatggag
gctatcgcatacaccgctatggcttatgaagttggcggttccattgaggcgatgcgtgcg
ccagccacgcacagaatcgcatgctcgtatcggatcaatattgcaaatgggaattttttt
gtgggcggctctgggtggggtgatttcaaagctaagagtcaagagctggctaacgaaaac
aagttcgcagcaataacggatatttctgatttctacaatcagatctatctacatcgcctc
caaaatgccatagaagcttctggcccagctcacaagtcactggcatcagatatagaggac
tttctgttggccttgaacaacaaggcttcgcaaggcgtgccggtagggccggccgctagc
atcgttatggctgaagcagtgctcatagatattgactcattcatctcacagtgcggagtt
ctgcatacacgatacgtggacgacattcgaatcttcagtaattcagcagccaagcttgcc
gaaacactcgaaaagctcacgctctatctctacgaaaaccaccggcttacgcttgctact
gataagactaaactcatgccaagtgaagattttatagaaaaccatcttcacaacccatac
ttagatgacaaggatgagctaatggaagagctcgataatatcagcccttacggcggcgaa
gatgaagatgaagatgaaggtttggacgatgacgatatcggcgaaacattagctggtgca
ttgtataaaatacttgaattcgattacatcgacctagggctggcgaggagtatcattcga
acggcaaggcgcaacaaaattccgaacataatcacgatattgctggaaaacttcgaatac
ttcgctccggttactcccgatatatttctgtatctcgaagagttattcgatgcgtcgaca
gctgcaataataagagcaaaacttgaaaaagtttgtgatatgcaggaagcgaactgtgcg
cttgtgcgtatctggcttgaacacttcattgcgtcacattccagccttctagcaaatcaa
aagttaagaattttcgtgatgactggaccaaacatcgagaacaaagcccgcgccgcaata
acgttaggcgacatagcatgggtgcggacccacaaaggtcagatatacaatgtgggtgcg
cgcgctcgtcggtcaatcattaattcagctcgtgtactgccaagcgatgagcgcaatccg
tggctgaccttagtcgctcaaaacgctgcacttcctttggaaagatggttagccggttgg
gttaaagaaacggcatga
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