Xanthomonas citri pv. citri MN12: J164_04054
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Entry
J164_04054 CDS
T03735
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xcm
Xanthomonas citri pv. citri MN12
Pathway
xcm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J164_04054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcm03400
]
J164_04054
Enzymes [BR:
xcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J164_04054
DNA repair and recombination proteins [BR:
xcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J164_04054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AJY97307
UniProt:
A0A0U5BY87
LinkDB
All DBs
Position
complement(4565193..4565993)
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AA seq
266 aa
AA seq
DB search
MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA
STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGNLSVVSFYIPSGSSGELRQ
DYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPERDWLN
GLCADAPEDASAADGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLVTPGLR
DALKACSIYREERFSDHAPYIVDYAQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcagtttcaacgccaacggcctgcgctcggccgccagcaagggtttcttc
gcgtggttcgccgcccaggacgccgatgtgctgtgcgtgcaggagaccaaggcccaggag
catcaactggccgggccggacttcctgcccaccggttacaaagcctggtttcgcgacgcc
agcaccaagaagggctatagcggagtggcgatctacagccggcacgagcccgacgaggtg
cgtaccgcgctgggctggccggagttcgacgaagaggggcgctatatcgaagcgcgcttc
ggcaatctcagcgtggtgtccttctacatcccctccggttcctcgggcgagttgcgccag
gactacaagttccaggtgatgcaatggctgcggccgatcctggacgaatggctggccagt
ggccgccagtacgtgctgtgcggcgactggaacatcgtgcgcacggcgctggacatcaag
aactggaaatccaaccagaagaattccggctgcctgccgcccgagcgcgactggctcaac
ggcctgtgcgccgacgcgccagaagatgccagcgccgccgacggccgcggttgggtcgac
agctaccgcgtgctgcatccgcagggccaggactacacctggtggagcaatcgcggcgcg
gcgcgcgccaacaatgtgggttggcgcatcgactaccaactggtcacccccggcctgcgc
gacgccctgaaggcctgctcgatctaccgcgaagaacgcttctccgaccacgcgccgtac
atcgtggattacgcgcagtga
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