Xanthomonas campestris pv. raphani: XCR_0941
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Entry
XCR_0941 CDS
T01872
Name
(GenBank) tRNA-dihydrouridine synthase B
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcp03016
]
XCR_0941
Transfer RNA biogenesis [BR:
xcp03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
XCR_0941
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dus
NanE
DHO_dh
ThiG
His_biosynth
SOR_SNZ
TMP-TENI
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
AEL05858
UniProt:
G0CDF5
LinkDB
All DBs
Position
complement(985606..986604)
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AA seq
332 aa
AA seq
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MQIGPYTIAPKVILAPMAGVTDKPFRLLCKRLGAGLAVSEMTISDPRFWGTRKSLHRMDH
AGEPDPISVQIAGTEPQQLAEAARYNVDHGAQLIDINMGCPAKKVCNAWAGSALMRDEDL
VARILSAVVRAVDVPVTLKIRTGWDCDHRNGPTIGRIAQDCGIAALAVHGRTRDQHYTGT
AEYATIAQIKAALQIPVIANGDIDSPQKAAQVLRDTGVDAVMIGRAAQGRPWIFGEVAHY
LATGALLPPPSLAFVRDTLLGHLEALHAFYGQPQGVRIARKHLGWYAKDHPQSADFRAVV
NRAETPEAQLALTRDYFDALIAGVPPPLHAAA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcggcccctacaccatcgcccccaaggtgatcctcgcccccatggcgggcgtc
accgacaagccgttccgcttgctgtgcaagcggctgggtgcgggcctggcggtgtcggag
atgaccatctccgatccgcggttctggggcacgcgcaaatccctgcatcgtatggaccat
gccggcgagccggatccgatcagcgtgcagattgccggtaccgaaccgcagcagctggcc
gaagcggcgcgctacaacgtcgaccacggcgcgcagctgatcgacatcaacatgggttgt
ccggccaaaaaggtctgcaatgcctgggccggctcggcgttgatgcgcgatgaagacctg
gtggcacgcatcctgagcgcggtggtgcgtgcggtcgatgtgccggtgaccttgaagatc
cgcaccggctgggactgcgaccaccgcaacggcccgaccatcggacgcatcgcgcaggat
tgcggcatcgcggcgctggccgtgcatgggcgcacccgcgaccagcattacaccggtacg
gctgagtacgccaccatcgcgcagatcaaggccgcgctgcagattccggtgatcgccaat
ggcgatatcgattcaccgcagaaggctgcgcaggtgctgcgcgacaccggcgtggacgcg
gtgatgattggccgcgctgcgcagggccggccgtggatctttggcgaggtggcgcattac
ctggcgaccggcgcattgctgccgccgccgtcgctggccttcgtgcgcgacaccttgctc
gggcatctggaagcgctgcacgccttctacgggcagccgcagggcgtgcgcatcgcgcgc
aagcatctggggtggtatgcgaaggatcatccgcagagtgcggacttccgcgccgtggtc
aatcgcgccgaaacgcccgaggcgcagctggcgctgacccgtgattatttcgacgccttg
attgccggcgtgccgccgccgctgcacgctgctgcctga
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