Xanthomonas campestris pv. raphani: XCR_4031
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Entry
XCR_4031 CDS
T01872
Name
(GenBank) probable (di)nucleoside polyphosphate hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XCR_4031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcp03019
]
XCR_4031
Messenger RNA biogenesis [BR:
xcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XCR_4031
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AEL08890
UniProt:
G0CIE1
LinkDB
All DBs
Position
complement(4322271..4322888)
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AA seq
205 aa
AA seq
DB search
MIDPDGFRPNVGIVLMREDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELREETGL
LPEHVELLGATPGWLRYRLPSRAVRRNERQVCIGQKQVWFLLQFTGQESHLKLDHTDSPE
FDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQTVAGPAAVGVMPQRALEAWLPGSS
AAGHDRPRKRPRKRGGVLPVRINND
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggacggtttccggccaaacgtcggcattgtgctgatgcgtgaggatggt
caggtgttctgggcacgacgtgtgcgcagggatggctggcagttcccgcaaggcggcatg
aataccgatgagactccggtggaagccatgtaccgcgagttgcgtgaagaaaccgggttg
ttgcccgagcatgtggaattgctcggcgccacccctggttggctacgctatcgcctgccc
agccgggcggtgcgtcgcaacgaacgccaggtgtgcatcggccagaagcaggtctggttc
ctgctgcagttcaccggacaggagtcgcacctcaagctcgaccataccgacagcccggag
ttcgatcactggcgctgggtggatttctggtatccggtggagcacgtggtgatgttcaag
cgcggcgtgtatgcacgcgcattgcgtcatctcgcgccgctcgcccagaccgtggccggg
ccagcagcggtgggcgtgatgccgcagcgtgcgctggaagcctggttgccgggcagcagc
gcagccggccacgaccggccgcgtaagcgcccacgtaagcgcggcggggttttgcccgtg
cggattaataatgattaa
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