Xanthomonas campestris pv. vesicatoria: XCV2975
Help
Entry
XCV2975 CDS
T00288
Symbol
rpoE5
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
xcv
Xanthomonas campestris pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcv03021
]
XCV2975 (rpoE5)
Transcription machinery [BR:
xcv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XCV2975 (rpoE5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
HTH_50
HTH_23
HTH_28
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CAJ24662
UniProt:
Q3BRA7
LinkDB
All DBs
Position
3385363..3386031
Genome browser
AA seq
222 aa
AA seq
DB search
MGNSGGAARSRQAQSSIVCLFSPLAVEIFVTVHSGCEELRCCANHPPCRPLTCPTGATPL
DTDLHTRFSALLQQHRGIVLKVAASYCRGRDDRDELAQEIATQLWRAFPGYDPGRRFSTW
MYRIALNVAISDLRGRRAAGEPIALDAVMERIADPQAHDPVRAQQVAALYAFIAQQPPLE
RALLLLYLDEHSYREIGEVLGISETNVATKLSRLKTRIRAEL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggtaactccggaggcgccgcacggagccggcaggcgcaaagcagcatagtgtgcctc
ttcagcccccttgctgtcgaaattttcgtgacagtccattcaggttgtgaggaattgcgc
tgctgcgcgaatcatcccccgtgtcgtcccttgacctgcccgaccggagccacgcccctg
gacacagacctgcacacccgcttcagcgccctgctgcagcagcatcgcggcatcgtgctg
aaggtggcggccagctattgccgcggacgcgacgaccgcgacgaactggcgcaggaaatc
gccacgcaactgtggcgggcatttcccggctacgacccgggtcggcgcttttccacctgg
atgtaccgcatcgccctgaacgtggcgatcagcgatctgcgcggccgccgcgcggccggc
gagccgatcgcgctggatgcggtgatggagcgcatcgccgatccacaggcgcacgaccct
gtacgcgcgcaacaggtggccgcgctgtatgccttcatcgcacagcaaccgccgctggaa
cgcgcgctgctgttgctctatctggacgagcacagctatcgcgaaatcggcgaagtgctc
ggcatcagcgaaaccaatgtcgccaccaaactcagccgactgaaaacgcgcattcgcgcc
gagctgtga
DBGET
integrated database retrieval system
