Xenorhabdus doucetiae: XDD1_3227
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Entry
XDD1_3227 CDS
T03784
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
xdo
Xenorhabdus doucetiae
Pathway
xdo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XDD1_3227 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdo03400
]
XDD1_3227 (uvrA)
DNA repair and recombination proteins [BR:
xdo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XDD1_3227 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XDD1_3227 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_23
DnaJ_CXXCXGXG
AAA_25
nSTAND3
NACHT
APS_kinase
cobW
Viral_helicase1
ScfRs
Motif
Other DBs
NCBI-ProteinID:
CDG18921
UniProt:
A0A068QW84
LinkDB
All DBs
Position
3421080..3423911
Genome browser
AA seq
943 aa
AA seq
DB search
MDNIEVRGARTHNLKNINLVIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PEHDITLAAQTISQMVDNVLALPEGQRLMLLAPVVKERKGEHARLLDNLATQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRADLAQRLAESFETALELSGGTAVIANMDDT
SAEELVFSANFACSICGYSMSELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVIQNEGI
SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDIEAPFNQLSPAIRKVVLYGSGKESIEFKY
TNDRGDVTVRHHPFEGVLHNMERRYKETESTAVREELAKYISNRSCVSCDGTRLRKEARF
VYIENTTLPQISDFSIGHAMAFFQNMKLSGQRAKIAEKILKEIRDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLLHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGEIVAEGTISDIMESPKSLTGKYLSGEHKIAI
PPQRVPANPDKMLKLIGAKGNNLKKVTLKLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATNINPAPYVDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFSGVPE
SRTRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIKY
KGKNINEVLNMTIEEAREFFDAIPALSRKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLSVLHLLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPEEVSQCEKSHTARFLKPILERV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataacatcgaagttcggggcgcccgcacccataatctcaagaatatcaatttagtt
attccccgtgacaagctgatagttattacggggctatccggttctggtaaatcatctttg
gctttcgacaccctgtatgcggaagggcaacgtcgctatgttgaatcactctctgcctat
gcccgccagtttttgtcactgatggaaaaaccggatgtcgatcatatcgaggggctatcc
ccggcgatttccattgagcaaaagtctacttcccataaccctcgctctacggtcggaaca
ataactgaaattcacgattatctgcgcctgctatttgcgcgggtgggagaaccgcgctgc
cctgaacacgatatcacgctggcggcacaaacgatcagtcagatggtggataatgtcttg
gcgctaccagaaggccaacgcctgatgctgctggctcctgtcgtcaaagaacgcaagggc
gaacatgccaggctgctggataatctcgcgacacagggttatatccgcgcccgtattgat
ggtgaagtgtgtgacctgtccgatcctccaaaactcgaattacagaaaaaacacaccatc
gaagtcgttatcgaccgttttaaagtacgagctgacctcgcccaacgattggcggaatcc
ttcgaaaccgcattggagctctccggtggcactgccgtcattgccaatatggatgataca
tcggccgaagagttggttttctccgccaattttgcctgctcgatatgtggctatagcatg
agtgaactggagcctcgcctgttttcctttaataatcccgcaggcgcttgcccaacttgt
gatggtctgggggttcagcaattttttgatcctgatcgggttatccaaaatgaaggtatc
tcccttgccggaggggcgatccgcggttgggatcggcgtaatttctactatttccagatg
ctgagatcactggcagaacactataaattcgatattgaagccccgtttaatcaattaagc
ccggccattcggaaagtagttttatacggttcaggtaaagagtccatcgaatttaaatat
accaatgaccgtggtgatgtgactgtgcgtcatcacccgtttgaaggggttctgcataat
atggaacgccgctataaagagacggaatccaccgcagtacgggaagagttggcgaaatat
atcagtaatcgatcttgcgtctcctgcgacggcacccggttgcgtaaagaagcgcgtttt
gtctatatcgaaaataccacgctgccgcaaatttcggattttagtatcggccatgcgatg
gcgtttttccaaaatatgaaactgagtggacaacgcgccaaaattgccgaaaaaatcctc
aaagagatccgtgatcgcctgaaattcttggtgaatgttggattaaattacctgtctctc
tcccgttcagcagaaaccctttccggcggggaagcccagcgtatccgtttggcgagccag
attggtgcgggtcttgtcggcgtaatgtatgtgctggatgagccctccataggcttgcat
caacgcgataatgagcgtttgctggaaacattgctgcatctgcgcaatttgggcaatacc
gtgatcgttgtcgaacatgacgaagatgccatccgtgcggctgatcatattattgatatc
ggaccaggtgcgggcgtacatggcggtgagattgttgccgaaggcacgattagcgatatc
atggagagtcccaaatcccttaccggaaaatacctgagtggtgaacataaaattgccatt
ccaccgcagcgtgtgcctgccaatccagacaaaatgctgaaattgattggggcaaaaggc
aataacctgaaaaaagtgacattaaaactgcctgttggcctgtttacctgtatcaccggt
gtttccggttctggtaaatcaacgttgattaacgataccttgttccctatcgcacagcgc
cagttaaacggagcaaccaatatcaaccctgccccttatgtcgatatccagggccttgag
cattttgataaagttatcgatatcgaccaaagtccgatcggcaggacgcctcgttcaaac
cctgccacttataccggcgtattcactcctgtcagggagttattctccggcgttcctgaa
tcccgtacccgtggctatacaccggggcgtttcagtttcaacgtcaaaggtgggcgttgt
gaagcctgtcagggtgatggcgtcattaaagttgagatgcactttttgcccgatgtttat
gtgccttgtgatcaatgcaagggcaagcgttacaaccgcgagacgctggaaatcaaatat
aagggtaaaaatattaatgaagtgctgaatatgaccatcgaagaggcacgtgagtttttc
gatgcgatccccgctctttcccgtaagctgcaaacgttgatcgatgttggtctctcttat
attcgcctggggcaatctgcaacgacactttcaggcggggaagcgcaacgggtaaaactg
gcgcgggaattatccaaacggggtacaggccaaaccctgtatatccttgatgagccaaca
actggcctgcattttgcggatatccagcaattgctgtccgttctgcatctattgcgcgat
caaggaaataccattgtcgtcatcgaacataatctggatgtgatcaaaacggctgactgg
attgtcgatcttggcccggaaggcggcagcggtggcggtgaaatactggtttcgggaacg
ccggaagaagtgtctcaatgtgagaaatctcacacggctcgctttttaaagccgatactt
gaacgagtttaa
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