Xylella fastidiosa M12: Xfasm12_1385
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Entry
Xfasm12_1385 CDS
T00677
Name
(GenBank) membrane-bound lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
xfm
Xylella fastidiosa M12
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xfm01011
]
Xfasm12_1385
Enzymes [BR:
xfm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Xfasm12_1385
Peptidoglycan biosynthesis and degradation proteins [BR:
xfm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Xfasm12_1385
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT_2
SoPB_HTH
Motif
Other DBs
NCBI-ProteinID:
ACA12313
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All DBs
Position
1439336..1440448
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AA seq
370 aa
AA seq
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MIKRIATSILTLGLVACASQPSSKRLVSTTTTEPTKKIDPSKVEETPLNLSPVPFEIARN
NFIRDTATKYNLDPIWIEKTLAQAQFKDAIVAAMSRPAEQVKPWNEYRSMFIAQARIDSG
RQFLASHKIQLKKVEAATGVPAELIVAIIGVESSYGTSPGKYRVLDALYTLAFKYPRSGD
PNKLKREVQRELFFRDELAQLFALSKEENLDITTLTGSYAGAMGMGQFMPSSYRQYAVDG
DGDGKRNLFTNEDDVFASIANYFLRKGGWVRGALVAVPATLASGYQEFDPPDWIPRYTLT
ELAARGYHTYVPVTAGITATPISLDNTTSKEYWLCFQNYYAITRYNPSKMYAMAVFQLSE
SIAGRTLPQT
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcgcatagcaacctcaatactgactctcggcctcgttgcctgtgcatcgcaa
ccctcatccaagcggctagtcagtacaacgacaacagaaccaacgaaaaagatagatccc
tcaaaagtggaagaaacaccactgaatctgtcgcctgtcccattcgaaatcgcgcgtaac
aatttcatacgtgatactgcaaccaagtacaacttggacccgatatggatcgaaaaaacc
ctagcacaagcccaatttaaagacgcaatagtagcggccatgtcgcgcccagccgagcaa
gtcaaaccgtggaacgaataccgatcaatgttcatcgctcaggcaagaattgacagtgga
cgtcaattcttagcctctcacaagatacaactcaaaaaagtcgaagctgctaccggcgta
ccagcagaactcatcgtcgcaattattggtgtcgaaagcagctatggtactagccccggg
aaataccgcgtactggacgcgctatacacactcgcctttaaatacccgcgcagcggcgac
ccaaacaaactcaaacgcgaagtacaacgggaattattttttcgcgatgaactcgcccaa
ctattcgcactcagtaaagaagaaaacctggatatcaccacattgactggcagttacgcc
ggagcaatgggcatgggacagttcatgccctccagctatcgtcaatatgcagtagacggc
gatggggacggcaaacgcaacctattcaccaacgaggatgacgtattcgcttcgatcgcc
aactacttcctccgaaaaggaggctgggtacgtggcgctctggtcgcagtaccagccacc
ctcgcttcgggttaccaagaattcgacccacccgactggatcccgcgttacaccctgacc
gaattagccgcacgtggctaccatacctatgttcccgtcacagccggtatcaccgccacc
ccgatcagtctggacaacaccaccagtaaagaatactggctgtgcttccagaactactac
gcgattacccgctacaacccctccaaaatgtacgccatggccgtgttccaactgtccgaa
tccattgccggccgcacactcccccaaacatga
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