Xanthomonas fragariae: BER92_13145
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Entry
BER92_13145 CDS
T04667
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00630
Glyoxylate and dicarboxylate metabolism
xfr00680
Methane metabolism
xfr01100
Metabolic pathways
xfr01120
Microbial metabolism in diverse environments
xfr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BER92_13145
09102 Energy metabolism
00680 Methane metabolism
BER92_13145
Enzymes [BR:
xfr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BER92_13145
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer4
Fer4_6
Fer2_4
NADH-G_4Fe-4S_3
Fer4_2
Fer4_7
Fer4_10
Fer4_9
Fer4_21
Fer4_8
Fer4_16
Fer4_17
Fer4_15
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
AOD15496
UniProt:
A0A1Y6HKH2
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All DBs
Position
complement(2876672..2879644)
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AA seq
990 aa
AA seq
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MQDGNQCAVVYDGKTLHGQADVPLIDFRGTHGIALSHICYHPALGAPQTCDVCWVEVDGE
LVRGCTLRSHDGLEVSSKVERAHAARHEGMDRVLAKHELYCTLCEHNTDDCTLHNTFADM
KMPIQRYAFQPTPYEKDRSNPFYTYDPDQCILCGRCVEACQKIEVNETLSIDFSMEHPRV
LWDGGKPIEQSSCVSCGHCVTVCPCNALLEKTMQPEAGPLTALPQELKRPLIDIVKRVEH
TIGAPPITGVSMLDMHLRQPEIKRTKTVCTYCGVGCSFEMWTRDRHLLKVQPVVDAPANG
ISTCVKGKFAWDFINDPKRLTTPLIREHGRFRKASWEEALSLVARRLLEIRDTHGPRSIG
FVGSSKASNEEAYLTQKIARLIIGTNSVDNSSRYCQNPATEGLFRTVGYGGDAGTIADLQ
QAELIVIVGSNLAENHPVIAAKLKAARKLRGQQLIVVDPRKHEMAERADLFLRPNASTDI
VWASALSRYMFDNGYADEAFLQQRVNHVGEYRASLAPFTLELAAEIAGISREQLVQAGEM
IGRARSVCIVWAMGITQHTHGADTRTALSNLLLVTGNYGRPGTGGYPMRGHNNVQGASDF
GCLKNMYPGYESVSDPAVRNKWAQAWRVPAEQLSLEVGIDNFKLVQEADEGAIRAMHVIG
EETAFADADARNVHRAFSGLDFLVVQDVFFSRTAEFADMVLPACPSVEKDGTFVNTERRI
QRFHEVMPPLRQSRPDWQILTELAARMGHDWGYTHPSRIMDEVAGIATLFKGVNYQRLQG
WRSLLWPMQADGSDTPLLYTERFHTDDGKARLYPLEWKQPGEVADAEFDLMLDNGRMLEQ
FQSTNQTGRGPWLWSLAPDWFVEISHELAAERGLQEGAWVKLSARRGAVEVPVVITDRVV
GKTVFLPIHQGKPGVNLLTGEHHDADVDTPAYKEVAVRMEVLGRQGKPPLPAHNSPHGHR
TPNAGVPVEQKWACDDYVLPPARAPHPERF
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatggcaatcaatgcgcagtggtctacgacggcaagacgctgcatggtcaggcc
gatgttccgctgatcgattttcgtggcacgcacggcatcgcgctgtcgcacatctgctat
caccccgcacttggcgcgccgcagacctgcgatgtttgctgggtcgaggtagatggcgag
ctggtacgcgggtgcacactgcgcagccatgatggtctggaagtttccagcaaggtggag
cgtgcgcatgcagcgcgtcatgagggcatggatcgcgtgttggccaagcacgagctctac
tgcacgttatgcgagcacaacaccgacgattgcacgctgcacaacacgttcgccgatatg
aaaatgccgatccagcgttacgcatttcagcccacgccttacgagaaggatcgcagcaat
ccgttctatacctacgatccggatcaatgcatcttgtgcggtcgttgcgtggaagcctgc
cagaagatcgaggtcaacgaaacgctgtcgattgatttttcgatggagcacccgcgggtg
ctgtgggacgggggcaagcccatcgagcaatccagctgcgtcagttgcggccactgcgtc
accgtgtgcccatgcaatgcgctgctggaaaaaaccatgcagcccgaagccggcccgctc
actgcgttgccgcaggagctcaagcggccgctgatcgacatcgtcaagcgtgtggagcac
accatcggtgcgccgccgatcaccggcgtgtccatgctcgacatgcatctgcgtcagcca
gaaatcaaacgcaccaagaccgtgtgcacgtattgcggggtgggctgttctttcgagatg
tggacgcgcgaccgccatctgctcaaggtgcaaccggtggtggatgcgccggccaacggc
atctccacctgcgtcaagggcaagttcgcctgggatttcatcaacgaccccaagcggctg
accacgccgttgattcgcgagcacgggcgttttcgcaaggccagttgggaggaagccttg
tcgctggtcgcacgccgcctgctggagatccgcgacactcacgggccgcgcagcatcggc
tttgtcggctcaagcaaggccagcaatgaagaggcctatctcacccagaagatcgcacgc
ctgatcatcggtaccaacagcgtggacaactcctcgcgctattgccagaaccctgccacc
gaggggttgttcaggaccgtgggctacggcggcgatgccggtacgattgccgacctgcag
caggccgagctgatcgtcatcgtcggtagcaacctggccgagaaccacccggtgatcgcc
gccaagttgaaggccgcacgcaagctgcgcggacaacagctcatcgtggtggacccgcgc
aagcacgaaatggccgagcgcgccgatctgttcctgcgccccaatgccagcaccgacatc
gtgtgggccagcgcgttgtcgcgctacatgttcgacaacggttatgccgacgaggcgttt
ctgcagcaacgcgtcaatcatgtgggcgaataccgggcatcgcttgcaccttttacgctg
gaattggccgccgagatcgccggcatttcgcgcgagcagctggtgcaggccggcgagatg
atcgggcgcgctcgctcggtgtgcatcgtctgggcgatgggcatcacccagcacacgcat
ggcgccgacaccaggacggcgctatcgaatctgttgctggtgaccggcaattacggccgt
cccggcaccggcggctacccgatgcgcgggcataacaacgtgcagggggccagcgacttc
ggttgcttgaagaatatgtaccccggctacgaaagcgtgtccgacccggcggtacgcaac
aaatgggcgcaggcctggcgcgtgccggccgagcagttgtcgctggaggtgggcatcgac
aacttcaagctggtgcaggaggccgacgaaggcgccattcgtgcgatgcatgtgatcggc
gaagagaccgcatttgccgatgccgatgcgcgcaatgtgcaccgcgctttcagcgggctc
gattttctggtggtgcaggatgtgttcttcagccgcaccgccgagttcgccgatatggtg
ttgccggcatgccccagcgtcgaaaaggacggcacattcgtcaatactgagcgacgcatc
cagcgctttcatgaggtcatgccgccgctgaggcagagccgccctgactggcagatcctc
accgagctggccgcgcgcatgggccacgactggggctatacgcaccctagccggatcatg
gacgaggtggccggtatcgccacgctgttcaagggcgtcaattatcaacgtctgcaaggg
tggcgctcgttgctatggccgatgcaggccgatggcagcgatacgccgctgctgtacacc
gaacgttttcataccgacgacggcaaggcgaggttgtacccgctggagtggaagcagcct
ggcgaagtggccgacgccgagttcgatctgatgctcgacaacggccgcatgttggaacag
ttccagagtaccaaccagaccggacgcggcccatggctatggtcgttggcgcccgattgg
ttcgtcgaaatcagccacgaactggccgccgaacgcggccttcaggaaggtgcctgggtc
aaattgagcgcgcgccgtggcgcagtggaagtgccggtggtgatcaccgatcgggtagtg
ggtaagaccgtgttcctgccgatccatcaaggcaagcccggcgtcaatctgctcaccggc
gaacaccacgatgccgacgtcgacacgcccgcctacaaggaagtggccgtgcgcatggag
gtgctcgggcgccagggcaaaccgccattgcctgcgcataactccccccatggccatcgc
actcccaatgccggtgtgccggtggagcagaaatgggcatgcgatgactacgttctgccg
cccgcacgggcgccacatccggagagattctga
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