KEGG   Xanthomonas fuscans: XFF4834R_chr24250Help
Entry
XFF4834R_chr24250 CDS       T03094                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
xfu  Xanthomonas fuscans
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:xfu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    XFF4834R_chr24250
Enzymes [BR:xfu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     XFF4834R_chr24250
DNA repair and recombination proteins [BR:xfu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     XFF4834R_chr24250
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2798113..2800731)
Genome map
AA seq 872 aa AA seqDB search
MSLSEYRRKRSFDKTCEPEPGKTLPPGQRAIFVVQLHHASRRHYDFRLQVGDALKSWAVP
KGPSYDPKVKRMAVEVEDHPVDYASFEGEIPRGEYGGGHVAQFDHGVWATAGDPEAQLAK
GHLRFELFGNKLKGGWHLVRSGKPARQPQWLLFKEDDAYAGTLEADDLLADVAAAPADDV
RRAGASKTQRKALTSVPPPAAKKRGTWAKQALALSNARRAEMEDGPFAPQLAKLGQSPPE
GAQWLHEIKWDGYRILATVTNGKVRLWSRNALEWTDKTPEIADAIQSLGLRSAQIDGELI
AGRGTKEDFNLLQATLSGERQVPLALAVFDLLHVDGVDIGEAPLRERKQLLQQVLEAAPH
AHLAYSSHVEGDGTEAFRVAGEQHFEGIISKRADRPYRDGRSDDWRKTKQLGSQEYAVVG
YTAPKGSRSGFGSLLLATPDPVHGWLYVGRVGSGFSDALMREVTQQLEGGGRKPTAHIPT
EDTDLRGATWFAPRFVVEVFYRGIGGQQLLRQASFKALRPDKRIADLADSDAGNGPATSS
STPRWAKTRAAKNAATQVPKRAATRATAAARKSAVATPGSAALPTLSSPTKLIYPDIRAT
KGDVWDYYHAVMDHLLPQIVGRPLSIIRCPSGAEKPCFFQKHHTAGLERVSSVKLTEETG
TNAYYLVVEDAPGLLELVQFNALEFHPWGSHADRPDVADRVVFDLDPGPDVPFPEVKRAA
NDIRKLLAQLELESFLRVSGGKGLHVVVPLNPGCDWEVTKRFAKGFADALAQSEPQRFIA
TATKRLRNKRIFVDYLRNGRGATAVASYSLRGRPGAPVALPLAWSDLSKLQRADAFTLRD
VPEKLRRRRKDPWADMDRIRQNLARWAEQDED
NT seq 2619 nt NT seq  +upstreamnt  +downstreamnt
atgagcctgagcgaataccgccgcaagcgcagcttcgacaaaacctgcgagccggagccg
ggcaagaccctgccgccggggcagcgcgcgatcttcgtggtgcaactgcaccacgccagt
cgccgccactacgattttcgcctgcaggtgggcgatgcgctcaagagctgggcggtgccg
aaggggccaagttacgaccccaaggtcaagcggatggcagtggaggtggaagaccacccg
gtcgattacgccagcttcgagggcgagattcccaggggcgagtacggcggcgggcacgtg
gcgcagttcgatcatggcgtgtgggccaccgcaggcgaccccgaagcgcagttggccaag
gggcatctgcgcttcgagttgttcggcaacaagctcaagggcggctggcatttggtgcgc
tcgggcaagccggcgcggcagccgcagtggctgctgttcaaagaggatgatgcctacgcc
ggcacgttggaggccgacgacctactggccgacgtcgctgccgcgcctgccgacgatgta
cgccgcgcgggtgccagcaagacccagcgcaaggcgctgacgagcgtaccaccgccagcg
gcaaaaaagcgtggtacctgggcgaaacaagcgctggcgctgagcaatgcacgtcgcgcc
gagatggaagatggcccgtttgcgccgcagctggccaagctggggcagtccccgcccgaa
ggcgcgcagtggctgcatgaaatcaaatgggacggttatcgcatcctggccactgtgacc
aatggcaaggtgaggctgtggtcgcgcaatgcattggagtggaccgacaagacaccggaa
attgccgatgccatccagtcgctggggctgcgcagtgcgcagatcgatggcgaattgatc
gccggacgcggcaccaaggaagacttcaacctgctgcaggccaccttgtccggcgaacgc
caggtgccgctggcgctggcggtattcgacctgctgcatgtggatggggtggacatcggc
gaggcaccgttgcgcgagcgcaagcagctgttgcagcaggtgctggaggctgcaccccac
gcgcacctggcctatagctcgcacgtcgagggcgacggcaccgaggcgttccgggtggcc
ggcgaacagcacttcgaaggcatcatttccaagcgcgcagatcgcccgtatcgcgatggg
cgtagcgacgattggcgcaagaccaagcaactgggcagccaggaatatgcagtggtcggc
tacacggcgcccaagggcagccgcagtggttttggctcgctgttgctggccacgccggac
ccggtgcacggctggctgtacgtcggccgtgtgggctcaggtttctccgatgccttgatg
cgcgaggtcacccagcaactggaaggcggtgggcgcaaacccactgcgcatattcccacc
gaagataccgacctgcgcggcgccacctggtttgcgccgcgctttgtggtggaggtgttc
tatcgcggcatcggtgggcaacagttgttgcgccaggcatcgttcaaggcgctgcgtccg
gataaacgcattgccgatctggccgacagcgatgccggaaatggcccggctacttcgtcg
tctaccccgcgttgggcaaaaacacgtgctgccaaaaacgcggcaacccaggtgccgaaa
cgtgcagcgacgcgggcaacagcagctgcgcgcaaatctgcggttgctacacctggctcg
gctgcgctgccgacgctgtccagcccgaccaagctgatctacccggatatccgcgcgacc
aagggcgatgtctgggattactaccatgcggtgatggatcacctgttgccgcagatcgtg
ggacgcccgctgtccatcatccgctgccccagcggcgcagaaaaaccgtgttttttccag
aagcaccacaccgccggcctcgagcgtgtgagctcggtcaaactgaccgaagaaaccggc
accaatgcgtattacctggtggtcgaagacgcacctggcctgctggagctggtgcaattc
aatgcgctggaattccatccctggggctcgcatgccgaccgcccggatgtggccgaccgg
gtggtcttcgatctcgacccgggcccggacgtgccgttccccgaggtcaaacgtgccgcc
aacgatattcgtaagctgctggcgcaattggagctggaatcgttcctgcgtgtctctggc
ggcaaggggctgcacgtggtggtgcccctgaaccccggctgcgactgggaggtgaccaag
cgttttgccaagggatttgccgatgcccttgcgcagtccgagccgcagcggttcatcgcc
actgccaccaagcggctacgcaacaagcgcatcttcgtggactacctgcgcaacggccgt
ggcgccacggcggtcgcgtcctattccttacgcggccgcccaggggcgccggtcgcgttg
ccgctggcgtggtcggacctgtccaagctgcagcgcgccgacgcattcaccttgcgcgat
gtgccggaaaagctgcgccgtcggcgcaaggacccgtgggcagacatggaccgcattcgg
cagaacctggcgcgctgggcggagcaggacgaggactga

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