Xanthomonas hortorum pv. gardneri: BI317_18150
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Entry
BI317_18150 CDS
T04668
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BI317_18150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xga02022
]
BI317_18150
02035 Bacterial motility proteins [BR:
xga02035
]
BI317_18150
Two-component system [BR:
xga02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
BI317_18150
Bacterial motility proteins [BR:
xga02035
]
Pilus system
Twitching motility proteins
BI317_18150
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_22
HTH_30
Motif
Other DBs
NCBI-ProteinID:
APP85798
LinkDB
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Position
3965155..3966549
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AA seq
464 aa
AA seq
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MSEPKSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLANNPYDLCLTDMRLPD
GNGIELVTEISKQYPQTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHAL
ELNNRDRPAPPPPPPEQASRLLGDSSAMESLRATIGKVARSQAPVYIVGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASTESLVDVRILSATHKDLGDLVSDGRFRHDLYY
RINVIELRVPPLRERSGDLPQLAAAIIARLARSHGRPIPLLTQSALDALDTYGFPGNVRE
LENILERALALAEDDQISASDLRLPAHGGHRLAASPGSAAIEPREAVVDIDPASAALPSY
IEQLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccaaaagtgccctggttgtcgatgacgagcgtgatatccgcgagttgctt
gttctcaccctgggccggatgggcctgcgcatcagcaccgctgccaacctggccgaagcg
cgcgagctgctggccaacaacccctacgacctgtgcctgaccgacatgcgcttgcccgat
ggcaacggcatcgaactggtcaccgaaatctcaaagcaatatccgcagaccccggtggcg
atgatcaccgcgttcggcagcatggacctggcggtggaagcgctgaaggccggcgcgttc
gacttcgtcagcaagccggtggacatcagcgtgctgcgcggcctggtcaagcacgcactg
gaattgaacaaccgcgaccgccccgccccgccgccgccgccgccggaacaggccagccgc
ctgctcggcgactccagcgcgatggaaagcctgcgcgccaccatcggcaaggtcgcgcgc
agccaggcgccggtgtacatcgtcggcgaatcgggcgtgggcaaggagttggtcgcacgc
accatccacgaacaaggcgcacgcgccgccggcccgttcgtgccggtgaactgcggcgcc
attcccgccgaattgatggaaagcgaattcttcggccacaagaaaggcagcttcaccggc
gcgcatgccgacaagcccggcctgtttcaggccgcgcatggcggtacgctgtttctggac
gaagtggccgaattgccgctgcagatgcaggtcaaactgctgcgcgccatccaggagaaa
tcggtacgcccggtcggtgcctccaccgaatcgctggtggacgtgcgcatcctctcggcc
acccacaaggacctcggcgacctggtctccgacggccgtttccgccacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtgccgcccctgcgcgaacgcagcggcgacctgccg
caactggccgccgccatcatcgcgcgcctggcacgcagccatggccgcccgattccgcta
ctgacccaatccgcgctcgacgcgctggacacatacggcttccccggcaacgtgcgcgaa
ctggaaaacatcctcgaacgcgccctggccctggccgaagacgaccagatcagcgccagc
gacctgcgcctgcccgcccacggcggccaccgcctcgccgccagccccggcagcgccgcc
atcgaaccgcgcgaagccgtcgtcgacatcgaccccgcctcggccgccctgccctcttac
atcgagcaactcgagcgcgccgcgatccagaaagcgctggaagaaaaccgctggaacaag
accagaaccgccgcgcagctaggcatcacgtttcgggcgttgcgctacaagctgaagaag
ttggggatggagtga
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