Xenorhabdus hominickii: A9255_14425
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Entry
A9255_14425 CDS
T04538
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9255_14425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xho03021
]
A9255_14425
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_14425
Enzymes [BR:
xho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9255_14425
Transcription machinery [BR:
xho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A9255_14425
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A9255_14425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AOM41653
UniProt:
A0A2G0QEE8
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All DBs
Position
complement(3152807..3153796)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTLNKSGIGPVTAADIIHDGD
VEIVKPQHVICHLTDESASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccattagagcgtggctttggccatactcttggc
aacgcactgcgccgtattctgctttcgtctatgccgggttgtgcggtgactgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggtgtacaggaagatatcctggag
attctcctcaatctgaaagggctggcggtgaaagttcagggcaaagatgaagttatcctt
accttgaataaatctggcattggccctgtgactgcagccgacatcatccatgatggtgat
gtcgaaatcgtcaagccgcagcacgtaatctgccatctgactgacgaaagcgcttccatt
agcatgcgtattaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgccctatcggtcgtttgttagtagatgcttgctatagcccagta
gagcgtattgcctacaatgttgaagcagctcgcgtagaacagcgtactgacttggataag
ctggttatcgagatggagactaacggtacaatcgatcctgaagaagcgattcgccgtgca
gctaccatcctggctgaacaactggaagcttttgttgacttacgtgacgtacgtcaacca
gaagttaaagaagagaagccagagtttgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaagcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttacttaagacacctaacctaggtaaaaaatctctt
actgagattaaagacgtactggcttctcgtggactttctctgggcatgcgcttggaaaac
tggccaccagcaagtattgctgatgaataa
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