Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00252
Help
Entry
AMD24_00252 CDS
T04108
Symbol
bamA
Name
(GenBank) Outer membrane protein assembly factor BamA precursor
KO
K07277
outer membrane protein insertion porin family
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xii03029
]
AMD24_00252 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xii02000
]
AMD24_00252 (bamA)
Mitochondrial biogenesis [BR:
xii03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
AMD24_00252 (bamA)
Transporters [BR:
xii02000
]
Other transporters
Pores ion channels [TC:
1
]
AMD24_00252 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
ALJ56440
UniProt:
A0A0P0GHJ8
LinkDB
All DBs
Position
complement(272062..274479)
Genome browser
AA seq
805 aa
AA seq
DB search
MSRVVWPVAPLHSIETFSIETFSVMHCLNPLTVVTTYLSRLVIIFCWSLCYFLLPVSDVL
LAQGDPLVQGIDIQFIGPPPRISRERVLANLSMKKGLPYSWRLAKQDVRSLYATGLVSDV
RISAEPLLNGVKVVVFIQGLPSIAAIHIKGTNQVPPARVRREISAKVDQALSEERLAEAR
RRIIRLYESKNFGQVRVSFSVQPTPKKNYVRVTFNIVEGPRIVVGKISFVGNSSLSSREL
RTSLRTKSRNLLSFINGSGRLTPERLDEDKRRIRLLYQNRGFADAECIGVQVKLLPRKRV
EVIYKVREGTQYHVRAIRFSGIPSNRSQKLLGLLRMREGALYTPKGLHGNLRAINGFYGK
CGFLDHSVNPHVFPVGASRVDLLFDVDEGVRSYVNLIRIQGNTRTRDFVVRRELALKPGE
IFDTQRMDISRARLQNLNYFSRVDLFPQSTLFPHRKDLHVLLEEKNTGNFNIGAGYSSID
SLVGFAELQQTNFDLFGWPTFYGAGQRLRIRMQYGLERKDFIVSLAEPWFLGRRLLVGIE
GYYHDADYLSTVYDQMYYGGAFHFRLPITSFISMRGECRREGIYVHSVAKNTGLYIQNSK
GRYTRNSLSAGLDYDTRDNLFLPRHGAIIRYTNFLSGGMLGGSVQDYGLSLDATRYVLLP
RDLIFMAKARIAVTTSWGRMHRDVPIFDRLYLGGSGDLRGFDFRDVGPKDKFGNAVGGSS
LFFGTLEVTFPVLPRIRGALFTDWGGVNVSNYDFSAKNTNGDIGVGLHLDFLAGTPVRFD
FGYPIKCDKYNRNKGRFQFNIGYQF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagtagtgtggcctgtggcgccacttcatagcatagaaacctttagcatagaa
acctttagtgtaatgcattgccttaacccattgaccgttgtgactacctatctctcacgt
ctggttatcattttttgctggtctctttgctattttctcctgccggtgtcggatgtcctt
ttggcacaaggagaccctttggtgcaaggaatcgacattcaatttattggcccccccccc
aggatcagcagggaacgtgttctcgcaaacctaagcatgaaaaaagggctaccctatagc
tggcgacttgcgaagcaggatgtgcgttccctttacgcaacgggattggtctcagacgtg
cgcatctccgcagaacctcttctcaatggagtaaaggtggtggtcttcatccagggatta
ccctccatagctgctatccatatcaagggcactaatcaggtgccgcctgcccgtgtgcgt
agggaaatttctgctaaggtggaccaggctttaagtgaggagcgtttagcggaagctcga
cggagaatcatcagactctacgagagcaaaaactttgggcaggtacgagtgtcattttcc
gttcagcctacacctaagaaaaactatgttcgggttacatttaatatcgtagagggaccc
cgtatagtcgtggggaagatctccttcgtcggcaacagttctctctcaagtagagaattg
cgtacctctttaaggacaaagagccgcaatctactttccttcattaatgggagtggcaga
ctgaccccagagcggttggatgaagataagcgcagaatccgtctcctctaccaaaatcgt
ggttttgcagatgctgaatgtatcggtgtacaggtaaagcttcttccacggaaaagggtg
gaggttatttacaaggttagggagggaacacagtatcatgttcgggccattagatttagt
ggtattccctccaatagatcgcagaagctgcttggcctccttaggatgcgggaaggcgcc
ctctacaccccaaagggtttgcatggtaatcttagggctattaatggcttttatgggaag
tgtggcttcttagaccatagcgtgaatcctcacgttttccccgttggagcttcccgagtc
gaccttctgttcgatgtagacgagggggtacggtcttacgtcaacctcatcaggattcag
ggcaatacccgtaccagagactttgtagttcggcgtgagcttgccctaaaaccgggggaa
attttcgatacgcaacggatggatattagccgggctcgcctgcagaacttgaattacttc
tcgcgtgtagatctttttccacaatctactctctttcctcaccggaaagatttacacgtt
cttctggaagagaaaaatacaggaaatttcaatataggcgcaggttatagcagcatcgat
agcttggttggtttcgcagagctgcaacaaaccaactttgacctgtttggctggccaact
ttctatggtgctggtcaacgtcttcgaattcgaatgcagtatggccttgagagaaaagat
tttatagtctcactggcggagccttggttcctgggccgtaggctcttggtaggcatagag
ggttactaccacgatgccgattatctcagtacggtttacgatcaaatgtactatgggggc
gcgttccactttcgtctacctatcacctcgtttatttccatgcggggtgaatgtcgcagg
gaggggatttatgtccacagtgttgctaaaaacactgggctatatattcagaactccaaa
ggcagatatacgagaaactctctttctgcaggattggattatgacacacgtgataacctt
tttttgcccaggcacggcgccataattagatacactaacttcctctccggaggcatgttg
ggtggaagcgttcaggattacggactgagtttagatgccacacggtatgtgctactgccg
cgggatttgatttttatggcaaaagctagaattgctgttacaaccagttggggaaggatg
cacagagatgttccaatttttgaccggctttatctgggagggtcaggtgacctccgagga
tttgattttcgggatgtagggccgaaggataagttcggaaacgccgttggagggagctcg
cttttttttggtacgctggaggttacattccctgtcctgcctaggattcgtggagccctc
tttacggattggggaggagtgaatgtgagcaactatgacttttcagcaaaaaacacaaac
ggggacattggcgtcggtcttcatctagattttctcgcaggtacgcctgttcgtttcgat
tttggatacccgatcaaatgcgataagtacaaccgcaacaaagggagattccaattcaat
attggataccagttctaa
DBGET
integrated database retrieval system
