Xenopus laevis (African clawed frog): 108716445
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Entry
108716445 CDS
T01010
Symbol
traf5.L
Name
(RefSeq) TNF receptor-associated factor 5 isoform X2
KO
K09849
TNF receptor-associated factor 5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04217
Necroptosis
xla04621
NOD-like receptor signaling pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108716445 (traf5.L)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108716445 (traf5.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108716445 (traf5.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108716445 (traf5.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
108716445 (traf5.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-TRAF_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_6
zf-RING_2
zf-C3HC4_4
Sec3_CC
Med4
Motif
Other DBs
NCBI-GeneID:
108716445
NCBI-ProteinID:
XP_018118064
Xenbase:
XB-GENE-6486947
UniProt:
A0A974CV65
A0A1L8G6D5
LinkDB
All DBs
Position
5L:11309314..11341878
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AA seq
555 aa
AA seq
DB search
MACEDLCPLPVTFARQNSSTAVSLDFVPKQGYLFVEQLQDRYKCASCHLVLHNPHQTGCG
HRFCEKCISNLIDLSETPQCPIDMETIKPHEIFKDNCCKREVLNLLVYCKNSPGCDVKVM
LGRYQEHLVQCLYETTQCSNEGCHDKMLRKELKGHLESECKLRPEACIYCKQIMASINLT
IHVGLYCPLYPVSCPNACPVTCPRAELDKHLYVCPEAELQCPFTNYGCNVKVKRGNMKEH
EDTFLRDHMLHVLNRNMKLEEQVLDLQQNLKLKEHQIQKLSDTVKWCENECNQFGQFTGS
NGNPLSSTMTLASYIDKSVWLEEQVLQLVSKEHSRFDLRPILDTLETTKERISTMETYKD
HIDNLDCEFKKHDMLLSSHKMQMTSNEERFRLLEGTSYNGKLIWKIADYERKKREAIEGR
TLSIFSQHFYTSWCGYRLCARAYLNGDGSGKGSFLSLYFVVMKGEFDSILPWPFKQKVTL
MLLDQSRKKNHITDIFRADPNSSSFKRPDSEMNIASGCPRFASHAQLENPKNGCYIKDDT
LFIKVVVDLTDLEEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcgaagacctctgtcctctcccggtgacatttgcaagacagaattccagcaca
gcagtttccctggacttcgtgcccaaacaggggtacttatttgttgagcaattacaagac
cgctacaagtgcgccagttgccacctggttcttcacaaccctcaccagacaggatgcggt
cacaggttttgtgagaaatgcatctccaacttaatagacctcagcgaaacaccacaatgt
ccaatagatatggaaactataaaaccacatgagatattcaaggacaactgctgtaagaga
gaagtcctcaatctgttagtttactgcaaaaactctcctggttgtgatgtaaaagtcatg
ttaggacgatatcaggagcacctggtgcaatgtctgtatgaaacgacccagtgtagcaat
gagggatgtcacgacaaaatgctccggaaagagttgaaaggccacctggaatcagagtgt
aaattaaggccagaagcatgcatatactgcaagcaaatcatggcttccatcaacctgacg
attcacgtaggcctgtattgtccattgtatccagtctcctgcccaaatgcctgccctgtc
acatgtccaagggctgagctggataagcacttgtatgtgtgccccgaggctgagttacag
tgtcctttcactaactatggatgcaatgtgaaggtaaaaagaggcaatatgaaagaacac
gaagatacatttctgagggatcatatgctccatgttttgaacaggaatatgaagctagaa
gaacaggtgctggatttacagcagaacctgaaactgaaggagcaccagatccaaaagcta
tcagacactgttaaatggtgtgagaatgaatgcaaccaatttggacaatttactggtagc
aatgggaatcctctctcaagcactatgactcttgccagttatattgataaatctgtgtgg
ctggaagaacaagttctacagctagtaagcaaagaacacagtcgctttgacctgaggcca
atattagacactctggagactaccaaggagaggataagcaccatggagacctacaaggat
catattgataacctggactgtgaattcaaaaagcacgacatgttgctgagtagtcacaag
atgcaaatgactagcaacgaggagcggtttaggctcttggaaggtacaagttacaatggc
aaactaatatggaaaatcgctgactatgagaggaagaaaagagaagcaatagaagggcgc
actttatccatattcagccagcacttctacaccagctggtgcggttaccgcctctgtgct
cgagcctacctaaatggagacggctcaggaaaaggttcctttctatcgttatattttgtg
gtaatgaaaggagagtttgattccatcttaccctggcctttcaagcagaaggtgacgctg
atgttattggaccaaagtaggaagaagaatcacatcactgacatttttagagctgatccc
aacagcagtagctttaagagacccgacagtgagatgaacattgcctcgggctgtcctcga
tttgcctcacacgcacaactggaaaacccaaagaacggctgttacattaaagacgacacc
ttgttcatcaaagtcgttgtagatttaacagacctggaggaggtataa
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integrated database retrieval system
