Xenopus laevis (African clawed frog): 734378
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Entry
734378 CDS
T01010
Symbol
samd4b.S
Name
(RefSeq) uncharacterized protein LOC734378
KO
K27396
protein Smaug
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
734378 (samd4b.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
734378 (samd4b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
734378
NCBI-ProteinID:
NP_001089328
Xenbase:
XB-GENE-17346446
UniProt:
Q58E80
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All DBs
Position
8S:86940907..86964295
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AA seq
675 aa
AA seq
DB search
MKFRDQVSTLSDWFKGWNECEQTVALLSLLKRITRTQARFLQLCLEHSLSDCTEIHILET
EANSAALISQWHQESKEKVISLLLSHLPLLQPRNTEAKCEYMKLLQKVLAYTTESNLYIE
ESRQLLSYALIHPATTLEDRNSLALWLNHLEERFSAGFSRYGRIETPSAHLRQDSDEWQP
PVDPCMGEASLSWQDKPSRENGLMPFHSSNLVSSGIQNMGSNTVLACQVHPSPLKRSMSL
IPTSQQAPGEWMGSEEVGSRSVFLTPDTAPLSPQSSVASSGSEQTEEVSAGRNTFAEDGS
GMKDVPTWLKSLRLHKYASLFSHMSYEEMMTLTEHHLESQNVTKGARHKIALSIQKLRER
PSVLKSLEKDILEGGNVRNALQELQQIVITPIKYYRPNQMDVTGSEQPPAQRPNQDLSCK
GSEENEPPPGLTADCFQQQSTPACDSEPAVPPIAEGDLPGQLTRVLGKVCTQLLVSRPDE
DNITCYLQLLEKCISHEAFTETQKKRLMSWKQQVLKLLRMIPRKALLEMQGWAFASNSLP
IAGSVGSSIVRRGQRPFQMPPRAVPPSRINVLSPGSIGGVSPRHALTSPSTASQGRQNLW
FANPGGSNSMPCPSHSSVQRTHSLPVHTSPQSILKFPPDCQVPGADLEINPRLESLCLSM
TEHALEEGTDKTSTI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgtgatcaggtgagcacattgtctgactggtttaagggctggaatgaatgt
gagcaaaccgtggcccttctatctttacttaagaggatcaccaggacccaggcacgtttc
ctgcaactttgtttggagcactctttatcagactgtactgagatacacatccttgagaca
gaggccaacagtgcagctctcataagccagtggcatcaagagtccaaagagaaagtgatt
tctctgctactttctcacttgccgctattgcagccccgtaacactgaggccaaatgtgag
tatatgaaactgctgcagaaagttctggcttacaccaccgagagcaatttgtacatagaa
gagagtcgccagttactgtcctatgcacttattcatcccgcgaccacccttgaagaccga
aactctctggctttatggctcaaccatctggaagaacgattctctgcaggcttcagtcgc
tatggaagaattgaaactccttctgcgcacctacggcaggattcagatgaatggcagcct
ccagtggacccttgcatgggggaggcgagcctcagttggcaggataaaccatcacgtgaa
aatggcctgatgccctttcattcttctaacttagtatcatcaggcattcaaaatatgggg
agcaacacagtgctggcctgccaggtgcatccaagtccactcaaacgctccatgtcactt
ataccaacatctcagcaggcacctggtgaatggatggggtcagaggaagtgggaagtcgg
tcagtgttcctcaccccagacactgctcctctgtcaccacagagcagcgtggcatcatca
ggcagtgagcaaactgaggaagtaagcgctggacgcaacactttcgcagaggatgggagt
ggtatgaaagatgtacccacctggttgaagagtttacggttgcacaaatatgcttcgttg
ttttctcatatgagctacgaagagatgatgacgctgacagagcaccatcttgaatcccag
aatgtcaccaaaggggcaagacataaaatcgccttgagtatacaaaagctccgggagaga
ccaagtgttctcaaatccttagaaaaggatattttagaaggcggcaatgtgcgtaatgct
cttcaggagttgcagcagattgtcatcacgcccattaaatactaccgtcctaatcagatg
gatgttactggcagtgagcagcctccagcacagagaccaaaccaagatctaagctgtaaa
ggatcagaggagaatgaacctccgcctggactcacagcagattgtttccaacaacagagc
accccagcctgtgattctgagccagcagttccacctatagcagagggagacctcccaggg
cagcttaccagagtgcttggaaaagtttgcacacagctactggtgtcacgaccagatgaa
gacaacatcacttgttacctgcagcttttagaaaagtgcatttcacatgaggcattcaca
gaaacccaaaagaagaggctgatgtcttggaagcagcaagttttgaaactactccggatg
attcccagaaaagcactgctggaaatgcagggctgggcatttgcatccaactcgctccct
atagctggatctgtggggtcttccatagtgcggagagggcagcgtccatttcagatgcct
cctagggcagtgccaccttcccgtattaatgttctgagtcctgggtcaatcggaggggtc
tctccacggcacgcacttaccagcccgagcactgcaagccagggtcggcagaacctgtgg
tttgccaatcctggtggcagtaacagtatgccgtgcccaagtcacagctctgtgcaacgc
acacattcgttaccagtacacacttccccccagagtattttaaagtttcctcccgattgc
caggtgcctggggctgatttagagattaaccctcggttggagtctttgtgtctgagtatg
acagagcatgctttggaagagggaacagacaagacatcgaccatctga
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