KEGG   Xiphophorus maculatus (southern platyfish): 102216491Help
Entry
102216491         CDS       T02923                                 

Definition
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  
histone deacetylase 4/5 [EC:3.5.1.98]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 Environmental Information Processing
  Signal transduction
   04371 Apelin signaling pathway
    102216491
Enzymes [BR:xma01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102216491
Chromosome [BR:xma03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102216491
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
LinkDB All DBs
Position
7
AA seq 1093 aa AA seqDB search
MNSHSRQVDVSTAALPSQVPSAASAILPMDLRIVDHSHHHHQQPPFGLVSQPHPTPAPST
ACPASSELGNGPVAGRQDQHLQQELVALKHKQELQRQLLIAEFHRQHEQLSRQHEVQLQE
HIKHQQDLLALKHQQELLEHHRKMEQQHHEQQLEKQQREQKLQQLKNKERGQESAVASTE
VKMRLQEFVLNKKKALAQRNLNHCMPSDPRYWYGKTQHSSLDQSSPPQAALSAYTHPVLG
AFDSKDDFPLRKTASEPNLKRRSWLKQKVTERRSSPLLRRKDGPITTAKKRSLDRADSAC
NSAPGSGPSSPNNSSSNIPSENGIPVSTSPGEASLIQRLATRDGSLSQLSLYTSPSLPNI
TLGLPASGPANSVVSGHQDGETHLALPALQPGIPLASAFLPTSHLPSYLASSALDRDGPG
GGAAGHNPLLQHMVLMEQSHSSMVGLGGLPLPSPTVSKLVRGHRPLGRTQSAPLPQQPCG
QAQALQQLVVQQQHQQFLEKHKQLFQQQHIINKIMSKPGDQVSAASSGASVPGRQHQSHP
EETEEELREHQGLTSSSSSSSTSSGPETGLIRGLVIKQEPPDLQEQEEREQRDQRERQAE
QDFMFKQQAMLLEQQRIHQLRSYRASMEAAGLPVSLAAHRPLSRTQSSPASASFPIVVSE
PPVKHRFTTGLVYDSLMQKHQCICGNATIHPEHAGRIQSIWSRLQETGLRAQCECIRGRK
ASQEELQTVHSEAHVQLYGTNPLRQKLECSVNPMFVRLPCGGIGVDSDTIWNEIHSSTAA
RLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNV
SKILIVDWDVHHGNGTQQAFYADPSVLYLSLHRYDDGNFFPGSGAPDEVGSGAGVGFNVN
MAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVDGHAPPLGGYKLTAK
CFSYLTRQLMGLAGGRLVLALEGGHDLMAICDASEACISALLGNELDPIPYEVLQQKPNA
NAVRSMEKVIEVQSKYWRSLQRSASTLGWSLNEALQRDVEEAETVSAMASLSVANKHIGK
RAEEEPMEEEAPM
NT seq 3282 nt NT seq  +upstreamnt  +downstreamnt
atgaactctcacagtcgccaagtggatgtgagcacagcggcgctcccctcgcaggttccc
tccgccgcctctgccatccttcccatggacctccgcattgtggaccactctcaccaccac
caccagcagcctcccttcggcctggtgtcccagccccatcccacaccagccccctccaca
gcctgtcctgcatcgtccgagctgggcaacggaccggttgctggccgtcaggaccagcac
ttgcaacaggaactggtggctctgaagcacaagcaggagctccagaggcagctactgatt
gctgagtttcataggcaacacgagcaactgtcgcgacaacatgaagtccagctccaggag
catattaagcatcaacaggacctgttggccctcaagcatcaacaagagctgctggagcat
cacaggaagatggagcagcagcatcatgagcaacagctggagaagcagcagcgggaacag
aaactccagcagctgaaaaacaaggaaaggggacaagaaagtgctgtggccagcacggag
gtaaagatgcgacttcaggagtttgtgctgaacaagaagaaagccctggctcagcgaaac
ctaaaccactgtatgcccagtgaccctcgctactggtatgggaaaactcagcatagttct
ttggaccagagctcaccccctcaagcggcgctgtcagcgtacacgcatccagtgctggga
gcgttcgactcaaaggatgactttcctctgaggaaaacagcatctgagcccaacctgaag
cgccgttcatggctaaagcagaaagtgacggagcgtcgaagcagtcctctgctccgcagg
aaagacgggccaatcactactgccaagaagagatcactcgacagagctgactctgcatgc
aacagtgcgccaggctccggccccagttcccccaacaacagctccagtaacatccccagt
gaaaatggcatcccagtctctaccagcccaggagaggcctctctgattcagaggctggct
accagggacggctcactcagccagttgtctctctacacctcaccttctctgcccaacatc
actttaggactgcctgcctccggccctgcaaactctgtggtatcgggacaccaagatggc
gagactcatctggcgctgccagcgttacagccgggcattccgttggcctcggcttttctg
cccacctcccacctgccgtcctacttggcctcgtcggcgttggacagggacgggcctgga
gggggcgcagctggtcacaaccccctccttcaacacatggtgctaatggagcagagccac
agctcaatggtcggtctgggtggcctgcctctcccatctcccaccgtctccaaactggta
cggggccaccgtcccctgggaaggacccagtcggcccctctgcctcagcagccgtgcgga
caggcccaagccctgcagcagctggtggtccagcagcagcatcagcagttcctggaaaag
cacaagcaactgttccaacagcagcacatcatcaataagatcatgtctaagcctggcgat
caggtgtcagctgccagctctggagcctctgtgccgggtaggcagcatcagagtcaccca
gaggagacagaagaggaactcagggagcaccagggactgacctcatcctcgtcgtcatca
tccacttcgtctgggccagaaacggggttgatacggggtctggtcatcaagcaggaacca
ccagacctccaagagcaagaagagagggaacaacgggaccagagagagagacaggctgag
caggacttcatgttcaaacaacaggcgatgctgttggagcagcagcggatccaccagctg
cggagctaccgagcctccatggaagcggccgggttaccggtcagccttgctgctcaccgc
cctctgtcccggacgcagtcatccccagcctccgcttccttccccattgttgtctcggag
cctccagtgaagcaccgattcaccacaggtctagtgtatgactccttgatgcagaaacat
cagtgtatctgcggcaatgccactattcatcccgagcatgccggccgtattcagagtatc
tggtcccggctgcaggaaacaggcctgagggctcagtgtgagtgtatccgtggaaggaag
gcgtcacaggaggagctgcagacggttcactctgaggcccacgtccagctgtacggaacc
aacccgctgagacagaaactggagtgttccgtgaatcccatgtttgtgaggttaccatgt
ggaggcattggggtggacagtgacacaatctggaatgagatccattcgtctacagctgct
cgactggccgttggctcagtggtggagctggttttcaaagtagcaacaggagagctgaag
aacggttttgctgtagttcggccacccggacaccatgctgaggagagcacacctatgggt
ttctgttatttcaactctgtcgccattgcagccaagctcctgcagcagaggcttaatgtc
agcaaaatcctcatagttgactgggatgttcaccatggcaacgggacccagcaggccttc
tacgcagaccccagtgttctgtacctttctctacatcgctatgacgatgggaacttcttc
cccggcagcggagctccagatgaggtgggcagcggtgcaggtgtgggcttcaacgtgaac
atggcatttactgggggccttgaacctcccatgggggacgcagagtatctggctgccttc
agaacggtggtgatgcccattgccaatgagttcgctccagatgtggttctggtgtcctct
ggcttcgatgctgtcgacggacatgccccaccgctcggaggatacaaactgacagccaaa
tgcttcagctacctgaccaggcagctgatgggcctggccggcggtcgcttggtgcttgcc
ctggaagggggtcatgacctgatggccatatgtgatgcctctgaagcctgcatttctgct
ctgctcggcaatgagttggaccccattccttacgaggtgctgcagcagaaaccaaatgct
aatgctgtgcgctctatggagaaagtcattgaggttcagagtaaatattggcgctctctg
cagcgttctgcctccaccctcggttggtcgttgaatgaagcgctgcagcgtgacgtggag
gaagctgaaactgtttcagccatggcttcgttgtcagtcgctaacaagcacattggaaaa
agggctgaagaggagccgatggaagaggaagctcccatgtaa

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