KEGG   Xiphophorus maculatus (southern platyfish): 102219500
Entry
102219500         CDS       T02923                                 
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
  KO
K07207  tuberous sclerosis 2
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04115  p53 signaling pathway
xma04140  Autophagy - animal
xma04150  mTOR signaling pathway
xma04218  Cellular senescence
xma04910  Insulin signaling pathway
xma05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    102219500 (tsc2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102219500 (tsc2)
  09143 Cell growth and death
   04115 p53 signaling pathway
    102219500 (tsc2)
   04218 Cellular senescence
    102219500 (tsc2)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    102219500 (tsc2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102219500 (tsc2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102219500 (tsc2)
Protein phosphatases and associated proteins [BR:xma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102219500 (tsc2)
SSDB
Motif
Pfam: Tuberin DUF3384 Rap_GAP
Other DBs
NCBI-GeneID: 102219500
NCBI-ProteinID: XP_023190279
Ensembl: ENSXMAG00000012749
LinkDB
Position
5:21882188..21910294
AA seq 1868 aa
MNKQQSKETLKEKVKGIFGLGTQRQQTKQCDSKLPEFIITADIIKELHPDCGLSNRIRMM
NQICDLAKIKKFEENAVEAVWKAVEDMLSPEQPAEARHAVLQLLRAIIQGQGEWLGPLRA
YFFKVIRDYQPCNEDLSERLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKYNSCYLDQNVSSMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSESLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQMIGSAELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKRPD
ASVLTLVSYRAQSIQPAKDGWIQSLHCLMEKFFRNETRSGIRIKVLHILSFVLSTNRQLY
EDELIEKVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVASRSLV
CSGSLEASDPIADSPMEDVKTAVLGLLEILQSKLYSLPASHASRVYELLISHLQLHYKSK
YCSAIASAVRLQVFDFFLMMRADSLHRVGVPNKDGVMRFSPYCYCDAGEPEKRVCDKKPS
GSISPPAGGPAAAAAAPPASAASIRSACLPYAPAFSVLLQCLKMETDWKVLKLVLDKLPW
TLQYKVLLLTSSCSLDQLCSTLCAMVTDRQISERLKKMPEGFSRTDVQLAVVPVLTAITS
YHSYLDQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTHISA
TVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIAM
WFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSPFRARSTSLNERPKSLRAGKVAKP
AASVANSSSSPVKELRDLSAMEAFRSRSISVSEHAVRRMQTSTTTCSLGSADENAATQAD
EGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITTS
GGVRTQALLGMDMSERLGGGGGEMTRSDPSLHTRMTKEAPAKLESQSSQQQNRTTRTRVR
SRSGGHALRAGPIPSLSPLVSPSEGELASPLSPSSGPTLDGVGPPSSTAAALSAPPPLKD
NPSLAEFVPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSTVLMAME
GVKEPPTQTASAPASTAAPAPTSASEPLTQTHSSAGGKANLFQRSSTDSAAVPEEGSGVT
AESAPLEWVEGEEFEPIPSEPIFMSDKAPLPGPLSRSSSTSSQDDEKSTLEEVSEGAIPI
DQPSVGPSTPGSQGPDLPFQSHSQSQGHGLNKSSSSPELQTLPEAFTKAALESEKSQGDA
ARPRAPSDGKPQALQQPCSDKDKVEGSTGADFNGPGGPAQGGEGSGLLSQSGGTAMKLAF
PAAPALPGPISPGGGHRPRGHTISVSAPSSRRERKTERDSYHSRPGPSNAEKLSGLSPSF
VFLQLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVGAGQVNNEVA
ILSNEYGSNRYAAFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFH
IATLMPNRESDKGCCNKKRHIGNDFVMVVYNDSGEDYKLGTIKGQFNFVEVVIKPLDYEC
NLVSLQCRKDLEGLVDTTVAKIVSDRNLPLFVRQMALHANMASLVHQYRANPSDAYASKW
LARLRHIKRIRTRAQEDIQSRSTPGISLTQGHTGQNKAFQQGASAPTPEMSGQRKRLVST
VDDFTDFV
NT seq 5607 nt   +upstreamnt  +downstreamnt
atgaataagcagcaaagcaaagaaacgctaaaagaaaaagtgaaggggatctttgggctc
gggacgcaacggcagcaaacgaagcagtgcgactcgaagctgccagagtttataatcaca
gccgacataataaaggagctgcatcctgattgtggcctgagcaaccgcatccggatgatg
aaccaaatctgcgatcttgcaaaaatcaaaaaattcgaagagaatgcagtggaggctgtg
tggaaagccgtggaggacatgctgtccccggagcagccggcagaggctcgacacgcggtc
ctgcagcttctcagggccatcatacaaggacagggtgagtggctcggtcctctgagggcg
tacttttttaaggtgatcagagactaccaaccctgcaacgaggacctttcagaaagactg
gaggtgttcaaggctttaactgaaaatgggaaggacatcacatacttggaggaggacata
gcacggtttgtcctcctgtggatggacataggtctcacctcagactttctccatgttctt
gtgaatttggtcaagtacaacagctgctatctggatcagaacgtctccagcatggtgcag
aaaatctgtcttctgtgcaacaggacaacatcatccactgacatagaggtggcgctgcag
gtcttggatgccgttgtgtgctacaactgcctgccctctgagtccctcaccgtcttcatt
ataacactctgccgtacggttaacgtgaaggagttctgtgaatcctgctggaagctgatg
aggaaggttctggggacgcatctgggccacagcgctatttacaccatgtgccgcatcatg
gaggagagggtgtacatggaggacgctccactgctgagaggagccgtgttctttgtggga
atggctctgtggggcgcccacagactccctgctctaaaaaacacaccaacactagtgctg
ccttcattctacaaggccatgtcatgtgccaacgaggtggtgtcgtatgagatcgtcctc
tccatcaccaggctgattaagaaatacggcaaagagctccaggtggtcacatgggacatc
ctgctgggcatcatagagcggctgctgcagcagattcagatgataggcagcgcagagttg
aaggccatcgtttatgagcttctgaccacagtggaagagctgtacgagcagaacggctac
cacggctccacggagaagttcttcagtctggtggagaaatgtgcagacaagagacctgac
gcctcagtgctgaccctcgtctcgtacagagcacaatccattcagcctgcgaaggatggc
tggattcagagcctccactgcctgatggagaaattcttcagaaacgagacgcgcagtggc
atcaggatcaaagttcttcacatcctgtcgttcgttctgagtactaatcgccagctctac
gaggacgagctaattgagaaggtggtgatccctcagctcagtgggatcgctgaagaccgg
gacctggcggtcagaaagcaggccacccagctgctggtggacctcgctgagggctgcaac
acgcatcacttcaccagcctcctggacatcatcgagcgggtggccagtcgctctctggtt
tgctctggatccctggaggcttctgaccccatagctgactctcccatggaggatgtcaag
actgcagtgctggggctgctggagatcctgcagagcaaactttacagcctgccagccagc
catgccagtcgtgtttatgagctgcttatcagccacctgcagctccactacaagagcaaa
tactgctcagctatcgcttctgctgttaggctgcaggtgtttgacttcttcctgatgatg
cgtgccgactctctgcaccgcgtcggggtgcccaacaaggacggagtgatgaggttcagc
ccttactgctactgtgacgctggggagccagagaagcgggtttgcgataagaagccctca
ggttccatatcgccccctgctggcggtcctgctgcagctgctgcggctcctcctgcttca
gcagcctccatccggtcagcctgtcttccctacgcgcctgccttcagcgtcctgctgcag
tgcctcaagatggaaactgactggaaagtgctgaaacttgttctggacaaactgccttgg
acactgcagtacaaagtgctgctgctcacatcgtcatgcagcttggaccagctctgttcc
acgctctgcgccatggtgacggatcgtcagatctcggagcgtttgaaaaagatgcctgag
ggtttttcccgcacagatgtccagctggctgtggttcccgttctcacggcgataacctct
taccatagctacctggaccaatccagacagagagagttagttcagtgtctggagaccggc
ctcatctatcgctgtgccaagcagtgtgtggtggctcttacgatgtgcacagtggagatg
cctgacatcatgatcaagcttctcccggctctgatagtcaagctcacccacatctctgct
accgttgccatggcgtctcccatgcttgagtttctctccactctggtgcgcttaccccat
ctgtacgccaactttgtagccgagcagtacgtaagcgtgttcgccatctcgctgccctac
actaatccatccaaattcaatcaatacatcgtatccctggcccatcatgtgatcgccatg
tggttcatacgctgcagactccccttccgcaaggactttgttcagtacatcaccaagggc
ttgcgctccaacgccttgcttccgtttgacgacggacacgagcaaagccctttccgcgcg
cgaagcaccagcctcaatgagagacccaaaagcctgcgggctggaaaagtggcaaagccg
gcggcatcagtagccaatagcagcagctctccagttaaagagctgagggacctttcggcc
atggaggctttccgctcccgcagcatcagcgtctccgaacacgcggttcgcaggatgcag
acttctaccacgacctgcagtctgggctctgctgatgaaaatgcagcgactcaggccgat
gagggactcaagaccgtccacctggagctcacggagacgtgtctagacatgatggctcga
tacgtgttctcaaacttctctgctctgccaaagaggtctccgatcgctgagtttctgtta
gccggaggtcgcagcatgacctggttggtgggcaacaagcttgtcaccatcacaacgagt
ggcggtgtcagaacgcaagctttgctgggaatggatatgtcagagcgtctgggaggagga
ggaggagaaatgaccaggtcagatccgtctcttcacacccgaatgactaaagaggctccg
gccaaactggagtcgcagtccagtcagcaacagaacagaacaactcggacgcgagtccgc
tcccggtcaggtggtcacgctctgcgtgctggtcctattccaagtctcagtcctctggtt
tccccctctgagggagagttggcctctcctctgtctccttcctctggccccaccctggat
ggcgtcggtcctccctcctccacagctgccgctctgtctgcccctcctccgctcaaggac
aaccccagcctcgccgagtttgttccaatgctcactcagggctgggcagagatcttcata
cggagaccctcaggtaacaccagctggctgatgtgtctggagaacccacccagtcccttc
tcctctgagctgggcaacatgccgctgcaggagctctccaccgttctgatggcgatggag
ggagtgaaggagcctcccactcagacagccagcgctccagccagcacggctgccccagcg
ccaacgtctgcctccgaaccgctcactcaaacacacagcagcgccggaggaaaggccaac
ctgtttcagcgctccagcaccgactctgcggcggttccggaggagggttcaggggtcaca
gcagagagcgcccctctcgagtgggtagagggtgaagagtttgagccgattccctccgag
cccatattcatgtctgacaaggcgccgcttcccggaccgctcagcaggtcctcctccacc
tccagtcaggatgatgaaaagtccactctggaggaggtgagcgaaggagcgattcccatc
gatcagcccagcgttggcccctccaccccgggcagccagggccctgaccttccttttcag
agccactctcagtcccagggtcatggactgaacaagtcgagctcctccccggagctgcag
acgctgccggaggccttcaccaaagcagcgctggagtctgagaaaagtcagggcgacgcc
gcgcgacccagagcgccctcagatggcaagcctcaggcactgcagcagccctgctcagac
aaggacaaagtagaggggagcaccggggcggactttaatggaccaggaggtccggcccag
ggtggtgagggctccggcttgttatctcagagtggaggaactgccatgaagttggccttt
ccagcagcgccagctctgcctggacccatctctcccggcggaggccaccgaccccgaggt
cacaccatctctgtctccgccccgtcctccaggagagagaggaagactgagagggactcg
tatcacagccgacccgggcccagcaacgcagagaagctctccggactgagtcccagcttt
gtcttccttcagctatatcactctcctttctttgggaatgaagccaataaaccgctgctg
ctgcccaaaactcaggtgattgatcgggctgtgaaggttctggaccagatgcctccttat
gatacccataagattggagttgtgtttgttggagctggccaggttaacaatgaagttgcc
atcctgtccaacgaatacgggtcgaaccgctacgccgcgttcctcaccgggctcggcaaa
ctaatccacctgaaggactgcgaccccgaccagatcttcctgggcgggctggatcagtac
ggggatgatggagagttcacctactgttggcacgacgacatcatgcaggccatcttccac
atagccacgctgatgccgaacagagagagtgacaagggctgctgcaacaagaagcgacac
atcggcaacgactttgtcatggtggtctacaacgactcgggagaagattacaaactgggc
accataaagggtcagtttaatttcgttgaagtggttattaagccactggactatgaatgt
aaccttgtatctctgcagtgtcggaaagacctcgagggcctggttgataccaccgttgca
aaaatcgtatctgaccgcaacttgccactctttgttcgacagatggctctgcatgcaaat
atggcttctttggtgcatcagtacagagcgaatccctcggatgcttatgcttccaagtgg
cttgccagattacgacacataaagaggatcaggaccagagctcaggaagacatccagtcc
cgttcgactccaggaatctctctgacccaaggacacactgggcaaaataaagcatttcaa
caaggagcttcagctcctactcccgagatgtcgggacagagaaaaagacttgtttcgacg
gtggacgactttactgattttgtttga

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