Xiphophorus maculatus (southern platyfish): 102219500
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Entry
102219500 CDS
T02923
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04115
p53 signaling pathway
xma04140
Autophagy - animal
xma04150
mTOR signaling pathway
xma04218
Cellular senescence
xma04910
Insulin signaling pathway
xma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102219500 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102219500 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
102219500 (tsc2)
04218 Cellular senescence
102219500 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102219500 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102219500 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xma01009
]
102219500 (tsc2)
Protein phosphatases and associated proteins [BR:
xma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102219500 (tsc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
102219500
NCBI-ProteinID:
XP_023190279
Ensembl:
ENSXMAG00000012749
LinkDB
All DBs
Position
5:21882188..21910294
Genome browser
AA seq
1868 aa
AA seq
DB search
MNKQQSKETLKEKVKGIFGLGTQRQQTKQCDSKLPEFIITADIIKELHPDCGLSNRIRMM
NQICDLAKIKKFEENAVEAVWKAVEDMLSPEQPAEARHAVLQLLRAIIQGQGEWLGPLRA
YFFKVIRDYQPCNEDLSERLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKYNSCYLDQNVSSMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSESLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQMIGSAELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKRPD
ASVLTLVSYRAQSIQPAKDGWIQSLHCLMEKFFRNETRSGIRIKVLHILSFVLSTNRQLY
EDELIEKVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVASRSLV
CSGSLEASDPIADSPMEDVKTAVLGLLEILQSKLYSLPASHASRVYELLISHLQLHYKSK
YCSAIASAVRLQVFDFFLMMRADSLHRVGVPNKDGVMRFSPYCYCDAGEPEKRVCDKKPS
GSISPPAGGPAAAAAAPPASAASIRSACLPYAPAFSVLLQCLKMETDWKVLKLVLDKLPW
TLQYKVLLLTSSCSLDQLCSTLCAMVTDRQISERLKKMPEGFSRTDVQLAVVPVLTAITS
YHSYLDQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTHISA
TVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIAM
WFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSPFRARSTSLNERPKSLRAGKVAKP
AASVANSSSSPVKELRDLSAMEAFRSRSISVSEHAVRRMQTSTTTCSLGSADENAATQAD
EGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITTS
GGVRTQALLGMDMSERLGGGGGEMTRSDPSLHTRMTKEAPAKLESQSSQQQNRTTRTRVR
SRSGGHALRAGPIPSLSPLVSPSEGELASPLSPSSGPTLDGVGPPSSTAAALSAPPPLKD
NPSLAEFVPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSTVLMAME
GVKEPPTQTASAPASTAAPAPTSASEPLTQTHSSAGGKANLFQRSSTDSAAVPEEGSGVT
AESAPLEWVEGEEFEPIPSEPIFMSDKAPLPGPLSRSSSTSSQDDEKSTLEEVSEGAIPI
DQPSVGPSTPGSQGPDLPFQSHSQSQGHGLNKSSSSPELQTLPEAFTKAALESEKSQGDA
ARPRAPSDGKPQALQQPCSDKDKVEGSTGADFNGPGGPAQGGEGSGLLSQSGGTAMKLAF
PAAPALPGPISPGGGHRPRGHTISVSAPSSRRERKTERDSYHSRPGPSNAEKLSGLSPSF
VFLQLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVGAGQVNNEVA
ILSNEYGSNRYAAFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFH
IATLMPNRESDKGCCNKKRHIGNDFVMVVYNDSGEDYKLGTIKGQFNFVEVVIKPLDYEC
NLVSLQCRKDLEGLVDTTVAKIVSDRNLPLFVRQMALHANMASLVHQYRANPSDAYASKW
LARLRHIKRIRTRAQEDIQSRSTPGISLTQGHTGQNKAFQQGASAPTPEMSGQRKRLVST
VDDFTDFV
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcagcaaagcaaagaaacgctaaaagaaaaagtgaaggggatctttgggctc
gggacgcaacggcagcaaacgaagcagtgcgactcgaagctgccagagtttataatcaca
gccgacataataaaggagctgcatcctgattgtggcctgagcaaccgcatccggatgatg
aaccaaatctgcgatcttgcaaaaatcaaaaaattcgaagagaatgcagtggaggctgtg
tggaaagccgtggaggacatgctgtccccggagcagccggcagaggctcgacacgcggtc
ctgcagcttctcagggccatcatacaaggacagggtgagtggctcggtcctctgagggcg
tacttttttaaggtgatcagagactaccaaccctgcaacgaggacctttcagaaagactg
gaggtgttcaaggctttaactgaaaatgggaaggacatcacatacttggaggaggacata
gcacggtttgtcctcctgtggatggacataggtctcacctcagactttctccatgttctt
gtgaatttggtcaagtacaacagctgctatctggatcagaacgtctccagcatggtgcag
aaaatctgtcttctgtgcaacaggacaacatcatccactgacatagaggtggcgctgcag
gtcttggatgccgttgtgtgctacaactgcctgccctctgagtccctcaccgtcttcatt
ataacactctgccgtacggttaacgtgaaggagttctgtgaatcctgctggaagctgatg
aggaaggttctggggacgcatctgggccacagcgctatttacaccatgtgccgcatcatg
gaggagagggtgtacatggaggacgctccactgctgagaggagccgtgttctttgtggga
atggctctgtggggcgcccacagactccctgctctaaaaaacacaccaacactagtgctg
ccttcattctacaaggccatgtcatgtgccaacgaggtggtgtcgtatgagatcgtcctc
tccatcaccaggctgattaagaaatacggcaaagagctccaggtggtcacatgggacatc
ctgctgggcatcatagagcggctgctgcagcagattcagatgataggcagcgcagagttg
aaggccatcgtttatgagcttctgaccacagtggaagagctgtacgagcagaacggctac
cacggctccacggagaagttcttcagtctggtggagaaatgtgcagacaagagacctgac
gcctcagtgctgaccctcgtctcgtacagagcacaatccattcagcctgcgaaggatggc
tggattcagagcctccactgcctgatggagaaattcttcagaaacgagacgcgcagtggc
atcaggatcaaagttcttcacatcctgtcgttcgttctgagtactaatcgccagctctac
gaggacgagctaattgagaaggtggtgatccctcagctcagtgggatcgctgaagaccgg
gacctggcggtcagaaagcaggccacccagctgctggtggacctcgctgagggctgcaac
acgcatcacttcaccagcctcctggacatcatcgagcgggtggccagtcgctctctggtt
tgctctggatccctggaggcttctgaccccatagctgactctcccatggaggatgtcaag
actgcagtgctggggctgctggagatcctgcagagcaaactttacagcctgccagccagc
catgccagtcgtgtttatgagctgcttatcagccacctgcagctccactacaagagcaaa
tactgctcagctatcgcttctgctgttaggctgcaggtgtttgacttcttcctgatgatg
cgtgccgactctctgcaccgcgtcggggtgcccaacaaggacggagtgatgaggttcagc
ccttactgctactgtgacgctggggagccagagaagcgggtttgcgataagaagccctca
ggttccatatcgccccctgctggcggtcctgctgcagctgctgcggctcctcctgcttca
gcagcctccatccggtcagcctgtcttccctacgcgcctgccttcagcgtcctgctgcag
tgcctcaagatggaaactgactggaaagtgctgaaacttgttctggacaaactgccttgg
acactgcagtacaaagtgctgctgctcacatcgtcatgcagcttggaccagctctgttcc
acgctctgcgccatggtgacggatcgtcagatctcggagcgtttgaaaaagatgcctgag
ggtttttcccgcacagatgtccagctggctgtggttcccgttctcacggcgataacctct
taccatagctacctggaccaatccagacagagagagttagttcagtgtctggagaccggc
ctcatctatcgctgtgccaagcagtgtgtggtggctcttacgatgtgcacagtggagatg
cctgacatcatgatcaagcttctcccggctctgatagtcaagctcacccacatctctgct
accgttgccatggcgtctcccatgcttgagtttctctccactctggtgcgcttaccccat
ctgtacgccaactttgtagccgagcagtacgtaagcgtgttcgccatctcgctgccctac
actaatccatccaaattcaatcaatacatcgtatccctggcccatcatgtgatcgccatg
tggttcatacgctgcagactccccttccgcaaggactttgttcagtacatcaccaagggc
ttgcgctccaacgccttgcttccgtttgacgacggacacgagcaaagccctttccgcgcg
cgaagcaccagcctcaatgagagacccaaaagcctgcgggctggaaaagtggcaaagccg
gcggcatcagtagccaatagcagcagctctccagttaaagagctgagggacctttcggcc
atggaggctttccgctcccgcagcatcagcgtctccgaacacgcggttcgcaggatgcag
acttctaccacgacctgcagtctgggctctgctgatgaaaatgcagcgactcaggccgat
gagggactcaagaccgtccacctggagctcacggagacgtgtctagacatgatggctcga
tacgtgttctcaaacttctctgctctgccaaagaggtctccgatcgctgagtttctgtta
gccggaggtcgcagcatgacctggttggtgggcaacaagcttgtcaccatcacaacgagt
ggcggtgtcagaacgcaagctttgctgggaatggatatgtcagagcgtctgggaggagga
ggaggagaaatgaccaggtcagatccgtctcttcacacccgaatgactaaagaggctccg
gccaaactggagtcgcagtccagtcagcaacagaacagaacaactcggacgcgagtccgc
tcccggtcaggtggtcacgctctgcgtgctggtcctattccaagtctcagtcctctggtt
tccccctctgagggagagttggcctctcctctgtctccttcctctggccccaccctggat
ggcgtcggtcctccctcctccacagctgccgctctgtctgcccctcctccgctcaaggac
aaccccagcctcgccgagtttgttccaatgctcactcagggctgggcagagatcttcata
cggagaccctcaggtaacaccagctggctgatgtgtctggagaacccacccagtcccttc
tcctctgagctgggcaacatgccgctgcaggagctctccaccgttctgatggcgatggag
ggagtgaaggagcctcccactcagacagccagcgctccagccagcacggctgccccagcg
ccaacgtctgcctccgaaccgctcactcaaacacacagcagcgccggaggaaaggccaac
ctgtttcagcgctccagcaccgactctgcggcggttccggaggagggttcaggggtcaca
gcagagagcgcccctctcgagtgggtagagggtgaagagtttgagccgattccctccgag
cccatattcatgtctgacaaggcgccgcttcccggaccgctcagcaggtcctcctccacc
tccagtcaggatgatgaaaagtccactctggaggaggtgagcgaaggagcgattcccatc
gatcagcccagcgttggcccctccaccccgggcagccagggccctgaccttccttttcag
agccactctcagtcccagggtcatggactgaacaagtcgagctcctccccggagctgcag
acgctgccggaggccttcaccaaagcagcgctggagtctgagaaaagtcagggcgacgcc
gcgcgacccagagcgccctcagatggcaagcctcaggcactgcagcagccctgctcagac
aaggacaaagtagaggggagcaccggggcggactttaatggaccaggaggtccggcccag
ggtggtgagggctccggcttgttatctcagagtggaggaactgccatgaagttggccttt
ccagcagcgccagctctgcctggacccatctctcccggcggaggccaccgaccccgaggt
cacaccatctctgtctccgccccgtcctccaggagagagaggaagactgagagggactcg
tatcacagccgacccgggcccagcaacgcagagaagctctccggactgagtcccagcttt
gtcttccttcagctatatcactctcctttctttgggaatgaagccaataaaccgctgctg
ctgcccaaaactcaggtgattgatcgggctgtgaaggttctggaccagatgcctccttat
gatacccataagattggagttgtgtttgttggagctggccaggttaacaatgaagttgcc
atcctgtccaacgaatacgggtcgaaccgctacgccgcgttcctcaccgggctcggcaaa
ctaatccacctgaaggactgcgaccccgaccagatcttcctgggcgggctggatcagtac
ggggatgatggagagttcacctactgttggcacgacgacatcatgcaggccatcttccac
atagccacgctgatgccgaacagagagagtgacaagggctgctgcaacaagaagcgacac
atcggcaacgactttgtcatggtggtctacaacgactcgggagaagattacaaactgggc
accataaagggtcagtttaatttcgttgaagtggttattaagccactggactatgaatgt
aaccttgtatctctgcagtgtcggaaagacctcgagggcctggttgataccaccgttgca
aaaatcgtatctgaccgcaacttgccactctttgttcgacagatggctctgcatgcaaat
atggcttctttggtgcatcagtacagagcgaatccctcggatgcttatgcttccaagtgg
cttgccagattacgacacataaagaggatcaggaccagagctcaggaagacatccagtcc
cgttcgactccaggaatctctctgacccaaggacacactgggcaaaataaagcatttcaa
caaggagcttcagctcctactcccgagatgtcgggacagagaaaaagacttgtttcgacg
gtggacgactttactgattttgtttga
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integrated database retrieval system