Xiphophorus maculatus (southern platyfish): 102229570
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Entry
102229570 CDS
T02923
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04510
Focal adhesion
xma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102229570
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102229570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
102229570
NCBI-ProteinID:
XP_014329261
Ensembl:
ENSXMAG00000016220
UniProt:
M4AP81
LinkDB
All DBs
Position
2:complement(20002986..20029485)
Genome browser
AA seq
1780 aa
AA seq
DB search
MILIFIFVCLPAVKPQDLQDQCPGGSCHPQLGDLMVGRGAQLSASSTCGVDGPQNYCIVG
YLEGEKKCFTCDSRLPFSPQGNPQSHRIENVITTFDSDRRLKWWQSENGVHQVSIQLDLE
TVFQFSHLVLTFKSFRPAAMLVERSKDFGQSWKVFRYFADDCSLHFPSVPAEPAGFIDDV
VCDRRYSGPEPSAGGEVVLKALDPVFEIDDPYAPNIQELITLTNIRVNFTRLFTLGDTLL
ARRRRDPQEKYYYSLYSMVVQGSCFCNGHASRCVPVDGGRGDVFTQSDMVHGRCVCQHNT
AGENCERCQPFHNDSPWKPGGETTPNICRRCNCHGHSDSCHFDAARYEETGGASGGVCDD
CRHDRTGPQCERCRPFLYQDPQRALEDPHACIPCDCDPAGSHSGGLCDASSGRCLCKENV
EGQRCDRCKHGFFNLRSDNPAGCEVCRCHGLGSVGPCDPLTGSCKCEPMATGLLCDHCVA
GFWGLGNSVFKCSPCDCDVGGASSNMCSSEDGQCSCLPNMVGRRCSDPAPGYFLPSLIYF
LYEAELAAQLTGGSSSPTPPAPLPVFPSSSPLVNPALLPSCEQYFRRQGYDFRISNGKVI
LIRRPRHLTHRRRRQNTNPLNRGPLQILPHQGSPEQSGTGLGLVRVTEGVGLRFTVDNLP
TSMEYQLVIRYESESVTDWVARVNIITLSPGDGGCSDDPPSGSLTLILPRSSRLSILDSR
VCLNARGRYYVEIFFDRQQGSDYAPLLVDSMGLVQSFYSVQDFCSQSDFDSFSHFRCVGL
DVYLGSQESLPKICEGLIKSLSARIHNGAVACTCNVIGSLGSGCSTLGGLCDCKPSVIGR
CCDACAPLTFGFGPEGCKRCECDPQGSLSEACDPSGGQCACRPRVSGRRCDRCESGFWGF
PLCQPCDCNGLSETCDGWTGQCVNCREHSSGPHCDRCVEGYYGNPVSRQPCQPCLCPDIL
SSGRFFASSCRYDPQSVRVSCSCREGHTGERCDRCSSGFYGDLRLPGAVCRACSCNNNID
PDDSNACDGTTGECLRCLHYTTGPRCQFCKPGYYGNALQHNCKECSCDRRGTKATLCPLE
SPCFCNRETGQCPCRTGVVGNLCDECENGFWNLDGASGCQPCSCDPSNSVSNICDKVSGQ
CPCRPEFGGRQCDECGENYFGNPDLQCFSCDCNLEGTQRPSCDPETGECICRTGVTGILC
DECTPGYSSEFPACEKCHECMVLWSENVTDVQRAAQRMRTFILLHGNTQHSTHSQYWQRM
LEIHSRLDSFGNMTGFSLPKLEKVEKLYMKIRKMKDAVDTNIILIDPSVLLNNEINNINV
EFQKMLKNLKDKLIKDPNKKETQPVEEMLQEIQKLHKTFMSDEKRVRNSNKAVEDSMDTR
WETKRKLSMWSGREDLATLEKKVKVLNMRQLNQKVCGQPDPEDCSGCPGGQICDGAVPHA
QKASETAEKVKEQLIKFPSSLDESKKKISDVQQVAQDTKDQAQDLQRQISDITKSVEREK
NKTRELLQRAKQYLMDEMVPPGDIEKMANAVLRIQLPQSPAEIQSMINEINKLLNNKFQE
DLKKLQDEAKTAQELLQKATDVKEQTKSINVKDILSDIIAADTAQSKANDDLEVANKDRD
DATDRIQEMENKLNDIEDKLMNQTVGLLEESEALKNKTEQNREMAKEARETAESALTNIS
NDTELQGVQEQFELLKQKHLNKTLEDEAADRLQKILKEIEDMQRQMEDRLQQIEDVEQKI
QLLIQRKEEKIVEVADLLNTVESLQKEIISKAQYYVTCSS
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcatctttatttttgtttgtctcccggcggtaaaaccccaggacctccaggac
cagtgccctggcggctcctgtcaccctcagcttggtgacctgatggtgggacggggagcg
cagctctcagcctcgtccacctgcggtgtggacggaccccagaactactgcatcgttgga
tacctggagggggagaaaaaatgtttcacatgtgactcccgactgccgtttagtccccaa
ggcaacccacagagccatcgtatcgagaacgtcatcacaacgtttgactccgacagacga
ctgaagtggtggcagtctgagaacggagttcatcaagtcagcatccagttggacctggag
actgtcttccagttcagccacctggtcctcaccttcaagagcttcaggcctgcagccatg
ctggtggagcgttcgaaggattttggacaaagctggaaagtttttcgctactttgcagac
gattgttcccttcattttccttcagttcctgcagaacctgccggcttcattgacgatgtt
gtctgtgacagaagatactctggaccagaaccatccgcaggtggagaggtggtgctaaaa
gctctggatcctgtctttgaaatagatgacccatatgctccaaacattcaagagctgatc
accttgacgaatatccgtgtgaacttcactcgtctcttcacgcttggtgacacgctgctg
gctcgcagacgcagagatcctcaggagaaatattattactcgctttacagcatggtggtt
cagggaagctgcttctgtaatggacacgcaagccgctgtgtccctgtggacggaggacgt
ggggacgtcttcacccagtctgacatggttcacggtcgctgtgtctgtcagcacaacaca
gctggggagaactgtgagagatgtcagccgtttcacaatgactccccctggaagcctgga
ggagaaactacacccaacatctgcaggaggtgtaactgtcacggtcactcagactcatgt
cactttgatgctgctcgctacgaagagaccggaggtgcaagtggcggcgtgtgtgatgac
tgccgccatgacaggacggggcctcagtgcgagcgctgtcgacctttcctgtatcaggac
ccgcagagggcgctagaggaccctcacgcctgcataccgtgtgactgcgaccccgccggc
tcccacagcggcggtttgtgtgatgcttcaagcggtcggtgtttgtgtaaggaaaacgtg
gagggtcaacgctgtgatcgctgcaaacatggtttcttcaatttgagatcggacaacccg
gctgggtgtgaagtctgcaggtgccacggcttgggaagtgttggaccatgcgatccgctt
acagggagctgtaaatgtgagccaatggccaccgggctgctgtgtgatcattgtgtggca
ggtttctggggtttgggaaactcagtcttcaaatgttcaccctgtgactgtgatgttggc
ggagctagcagcaacatgtgttcttcagaggatggacagtgttcctgtttacccaacatg
gtgggccggcgctgctctgaccctgcacctggttacttcctgccttcgctcatctacttc
ctgtatgaggcggaacttgctgcacagctgacaggagggagttcctcccctactcctcct
gctcctcttcctgtttttccctcttcctctccactggtgaatcccgcccttttgccttca
tgtgagcagtatttcagacgtcagggctatgacttccgaatctccaatggaaaagtgatt
ttgatacggaggcctcgtcatctcacccatcggaggagacggcagaataccaaccctttg
aaccgggggcccctgcagatccttccccaccagggctcacctgagcagtcaggaactggt
ctgggattggtcagagtgacagagggggtggggcttagattcactgtggacaacctgcca
acatcgatggagtaccagctggtgattcgctatgaatctgagtctgtcaccgattgggtg
gcgagagtgaacatcatcacgctgtcaccaggcgatggaggctgcagtgacgaccctcca
tcaggaagtctgacactgatcctccccagaagctccagattaagtattctggattcccgg
gtgtgtctgaacgccagaggtcgatactatgtggagattttctttgacaggcagcaagga
tcagactacgctcctctgctggtcgactcgatgggactggttcagagtttctattcagtc
caagacttctgctcccagagtgactttgactctttcagtcactttcgctgtgttggattg
gacgtgtatctcggttctcaggagtcacttccaaaaatctgcgaaggactgatcaagagt
ctgtcggcacgcatccacaacggagctgtggcctgcacgtgtaacgttattggttctctt
ggatcgggatgcagtacgctgggcgggttatgtgattgtaagcccagcgtgattggccgt
tgctgtgacgcttgtgcacctctgacctttgggtttggacctgaaggctgtaaacgatgc
gagtgcgaccctcaaggttctctgtcggaggcgtgtgacccgagcggaggtcagtgtgcg
tgtcgcccccgggtatccggtcgacgctgcgatcgatgcgaatctggattctggggattc
ccgctgtgtcagccttgtgactgcaacggcctgtcggaaacctgcgatggctggaccgga
cagtgtgtgaactgcagggagcacagcagcgggccgcactgtgacaggtgtgtggagggt
tactatggtaacccggtctccaggcaaccctgtcagccctgcctgtgccctgatatcctg
agcagtggacggttcttcgcctcttcctgtcgatacgacccgcagtccgtcagagtgagc
tgctcctgcagggagggacacacaggtgaacgatgtgacaggtgcagttcgggtttctac
ggcgacctgaggttgccaggtgccgtctgcagggcgtgctcctgcaacaacaacatcgat
ccggacgacagcaatgcctgcgacggcacaaccggagaatgtctccgctgccttcactac
acaacgggtccacggtgccagttctgcaagcctggttactatggcaatgccctgcaacac
aactgtaaagaatgctcctgtgatcgccgggggaccaaggcgactctatgtcccctggag
agcccctgcttctgcaacagggagacaggacagtgtccctgcaggacgggtgtggtggga
aatctctgtgatgaatgtgagaacgggttctggaacctggacggagcgtcggggtgtcag
ccctgcagctgtgacccgtctaactccgtctctaacatctgcgataaggtgtcgggacag
tgtccctgtcgtcctgagtttggaggaagacagtgtgacgaatgtggagaaaactatttt
gggaatccagacctgcagtgcttttcttgtgactgtaaccttgagggaacgcagcgcccg
tcgtgtgaccctgaaactggtgagtgcatctgtcggactggcgtcaccggtatcctctgt
gacgaatgcactccaggctacagctcagagtttcctgcctgtgagaaatgccatgaatgc
atggttctgtggtccgaaaacgtcactgacgtccagcgagccgcccaaaggatgcggacg
ttcatccttctccatggcaacacccagcattccactcacagtcagtactggcaacggatg
ctggagattcactccagactggacagctttggcaacatgactggtttctctctgccaaag
ctggagaaggtagagaaactctacatgaagattaggaagatgaaagatgctgttgacacc
aacataattctgatcgacccgtctgtcctccttaacaatgaaatcaataacattaacgta
gagtttcagaagatgctaaaaaacctgaaggataaactcatcaaggatccaaacaagaaa
gaaactcagccagtggaagagatgctgcaggagatccagaagcttcataaaactttcatg
tcagatgaaaagcgggtgagaaactccaataaagctgtggaggactccatggacaccaga
tgggagactaagcgcaaactgagcatgtggagcggcagagaagatctggcaactctggag
aagaaggtcaaggtgctcaacatgcgccaactcaaccaaaaggtctgcgggcaaccggat
ccggaggactgctctggatgtcctggaggtcagatctgtgatggagctgttcctcatgcc
cagaaagcttctgagacggcagagaaagtaaaagagcaactcatcaaattcccatccagc
ctggacgagtcaaagaaaaagatcagtgatgtccagcaagtggctcaggacaccaaagac
caggcccaagacctgcagcgccagatcagcgacatcaccaaatcagtggagagagagaaa
aacaaaaccagagagctcctccagagagccaaacaatatctgatggatgaaatggttcct
ccaggtgacattgagaaaatggcgaacgctgtcctgaggattcagctaccacaatcacct
gctgagatccaatcaatgatcaatgagatcaataaacttttgaacaacaaattccaggag
gacctgaagaagctgcaggatgaagccaaaacagctcaggagcttctgcagaaagcgaca
gatgtcaaggagcaaactaaaagcatcaacgttaaagacatcctcagtgacattattgct
gcagacacagctcagagcaaagccaacgatgacctggaggttgcaaataaggacagagac
gacgccactgaccgaatccaagagatggaaaacaaactgaacgacattgaggataagctg
atgaaccagactgtaggtctgctggaggagagtgaagctctgaaaaataaaacagagcaa
aacagagagatggcaaaagaggccagagaaactgctgagtcagcattgaccaacatttct
aatgacacggagctgcagggagttcaggagcagtttgagcttttaaagcagaagcacttg
aacaaaacccttgaagacgaagccgcagatcgactgcagaaaatcctgaaggagatcgaa
gatatgcagagacaaatggaggacagactccaacagatagaagatgtggagcagaagatc
cagctgctgatccagaggaaggaggagaaaatagtcgaggtggccgatctgctgaacacg
gtggagtcacttcaaaaggaaatcatctctaaagctcagtattacgtcacatgttcctca
taa
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