Xiphophorus maculatus (southern platyfish): 102238309
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Entry
102238309 CDS
T02923
Symbol
slf1
Name
(RefSeq) SMC5-SMC6 complex localization factor protein 1
KO
K26126
SMC5-SMC6 complex localization factor protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102238309 (slf1)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102238309 (slf1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
RTT107_BRCT_5
BRCT
TcdB_N
Motif
Other DBs
NCBI-GeneID:
102238309
NCBI-ProteinID:
XP_014325903
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Position
12:21452384..21490672
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AA seq
880 aa
AA seq
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MESCTHVFQISGIKAQDKKRVLIKGIYQLGGKYIGGSVYKHCTTHLITPQVLPSEKFLAA
CAAGKWVVTPNYVLESMKNGSWLPEGPYEVAIFTSPSAAFYPVRQWREKVAKGRITGAFQ
GWKVLLMVQEPNRRAMFKRLLKAGRAEVYNSPPPMYTPITHVMAKPVTEKTKSLNSPCYP
VSHIVQHLFGSNRLDMDFNKMDDLPSETKASCLEGFSNLEAELRNFAVKKEGRPRLCFLE
FLGYSDPHRPFTQAIVADLSNVSSMIECGLLSEALDSIRNAVFPGVLPPATYLISLIEYA
QQGNATSLFLRDFHQVMVNLLITNPPWLAQNSVKKYYAQVLQCPQCKMGLWPLLETAIRY
CLTNSDTCHPHPGPALPALVHFYCDMLALCLMLLKGELHSVNSRDFMFSNQPRASSAPAS
GSFLYGTFWTVWERTTLLSCTVKKLLQLLKEAAIMEFAEGAEKRELYLADTLLDLLSVLV
EFWCQQHFKLNQSLVEKGLKDLSEHLAILSQDLCPAVLVELVCRVHSTRLKLVVVDAIFR
NLCCRNGFIVGDEPLSLKKMVCSYLPALGTLAQSPSFATYKTEKTSHSCTSQGTSRTENR
PVTEESPERENAPRGMNRVNAAGETLLHRACKTNQVETVLQILAFPGTDVNVKDHAGWTP
LHEACNHGSTECVRALLHHHPAPVLTDQVAGVSPLHDALLNGHLDIAKMLLEHAGSVLLQ
QTDRDGQTPLDLVSVPSQREELLRSAQVRDSVRTNKDKTEVLNLPLLEAGSSLLGHLIFS
YQLERGLPGLTQSGNRPQTLVYKLVAALEKHSLQKVTSDWTDQRAVRLAEDVETLLRLSR
GEHKEQVSAAAKECRGENTVFLMETLKNLQARGKALVADL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggagagctgcacacatgttttccagatctctgggatcaaagcgcaggataaaaagaga
gttttgattaagggcatttatcagctcggtggaaaatacattggtggctcagtatacaag
cactgtaccactcacctcataaccccccaggttttgcccagtgagaagtttttggcagct
tgtgcggcagggaagtgggttgtgactcctaactatgtgttggaaagcatgaagaatggc
tcgtggttgcccgagggaccctatgaagtggccattttcaccagcccctcagctgccttt
taccccgtcagacagtggagggaaaaggtagccaaaggtagaataactggtgcttttcag
ggctggaaagttcttctcatggtccaagagcccaacagaagagccatgttcaaacggctg
ctgaaagctggaagagcagaagtgtacaactctcctccacctatgtacactcccatcact
catgtcatggcgaaacctgtgacggagaaaacaaaatctcttaactcaccttgttaccct
gtgagccacatagtgcaacacctcttcgggagcaatcgcctggatatggattttaacaaa
atggatgatcttccgtccgagacaaaagccagttgtcttgaaggcttctctaatttggag
gcagaactcaggaattttgctgtcaaaaaagagggccggcccagactgtgcttccttgag
tttctaggttacagtgaccctcatcgtcccttcacacaggcaattgtagcagatttaagc
aacgtcagtagtatgatagagtgcggcctactcagcgaggccttggattcaatcagaaat
gccgtgtttccaggcgtgttgccaccagcgacatacctgatctccctcatagagtacgca
cagcagggtaacgccacgtccctctttctgagagatttccatcaggttatggtaaacctg
ctcattacaaatcctccatggctggctcaaaattcagtgaaaaaatactatgcccaagtg
ctgcagtgtcctcagtgcaagatgggcttatggcctcttttagagactgcaatcagatac
tgcctgacaaacagcgacacctgtcacccacaccctggacccgccttgccagctttggta
catttctactgtgacatgcttgcactttgcctcatgcttctcaagggtgaacttcactct
gtcaatagcagagactttatgttttctaaccaacccagagcgtcatctgcaccagcttct
ggttcatttctctatgggactttctggaccgtgtgggaacgaacaacactgctctcctgc
actgtgaaaaagcttcttcagctcctaaaagaagctgccattatggaatttgctgaggga
gcagagaagcgggagctgtatttggcagacactctgctggatcttctgtctgtgttggtg
gagttttggtgtcagcagcactttaaacttaatcagagtctggtggaaaaaggcctcaaa
gacctctcggagcaccttgccattcttagccaggatctgtgtccagccgttttggtagag
ctggtttgcagagttcactccaccaggctaaagttggtcgtagttgatgccatcttcagg
aatctctgctgcagaaatggcttcattgttggcgatgaacctctctctctcaagaaaatg
gtgtgttcttacttgcccgctctgggaacgttagctcaaagtcccagctttgctacctac
aagactgagaaaacctcccacagctgcacgagtcaggggaccagcaggaccgagaacagg
ccggtgactgaagaaagccccgagcgagaaaatgcccccagaggcatgaacagagtgaac
gcagcaggcgagaccctcctacacagagcttgcaagacaaaccaagtggaaacggtgctt
cagatcctggcgtttcctggcacagacgtcaatgttaaagaccatgcaggctggactcct
ctccatgaagcatgcaaccatggcagcactgagtgtgtgagagcattgctgcatcaccac
cccgcccctgtcctcactgaccaggtcgccggagttagtccactgcacgatgccctgctg
aacggacacttggacatcgctaaaatgttactggaacatgcaggctcggttcttctccag
cagaccgacagagacggacagactccactggatctggtctctgtaccgagtcagagggag
gagctcctccgcagcgctcaggtcagagattcagtccgcacgaacaaagacaaaactgag
gttttgaaccttcctctcctcgaggctggatctagtctgctgggccatctcattttctcc
taccagttggaaaggggtctgcctggcctcacacagtcggggaacagaccccagaccctg
gtctacaagctagtcgctgcgttggagaaacactcccttcagaaagtcacttcggactgg
acagatcagcgggcagtgaggctggcggaagacgtggagacattgttgaggctcagtcga
ggagagcacaaagaacaggtgtctgcggctgccaaggagtgcagaggagagaacacggtt
ttcctgatggaaacactgaagaacctacaggctcgtggcaaggcactagttgctgatttg
taa
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