Xenorhabdus nematophila ATCC 19061: XNC1_2495
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Entry
XNC1_2495 CDS
T01274
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XNC1_2495 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xne03400
]
XNC1_2495 (xthA)
Enzymes [BR:
xne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XNC1_2495 (xthA)
DNA repair and recombination proteins [BR:
xne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XNC1_2495 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CBJ90553
UniProt:
D3VHA8
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All DBs
Position
2446212..2447045
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AA seq
277 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIVEQHRPDVIGLQEIKVHDEMFPLEEINKLGYHVFYHGQK
SHYGVALLTRQKPVDVRKGFPTDGDDAQRRIIMADLETPLGLLTVINGYFPQGESRDHPV
KFPAKEKFYQDLQSYLGNNHSPESNILIMGDMNISPTDSDIGIGENNQKRWLKTGKCSFL
PEEREWMERLKNWGFIDTFRFQYPEANDQFSWFDYRSKGFDDNRGLRIDLLLASHWLKGV
SLQVSIMSSAAWKNRPIMPLFGQHLQYNHQAKKQYHQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtttcatttaatattaatgggttacgagcacgtcctcatcagcttgctgca
attgtcgaacaacaccgaccagatgttatcggattacaggaaataaaagtccacgatgaa
atgtttcccttagaagaaatcaacaaattgggttatcacgtcttctatcatggtcagaaa
tcacactatggtgttgccttactaactcgtcaaaagcctgttgatgttcgtaaaggcttt
cctactgacggtgatgatgctcaacgccgtattattatggccgatctcgaaacacctctc
ggcttattaactgtcatcaacggttatttcccacaaggtgaaagccgtgatcatccggtt
aaatttcctgcaaaagaaaagttctatcaggatttacaatcctatctgggaaataatcac
tctccagaatcaaatattctgattatgggtgacatgaatatcagcccaacagattccgac
attggtatcggagaaaataaccaaaaacgctggttaaaaacagggaagtgctctttctta
cctgaagaaagagagtggatggaacgccttaaaaattggggctttattgatactttccgg
tttcagtaccctgaagccaatgatcaattttcctggtttgattatcgctcaaaaggcttt
gacgataatcgtggactacgcattgatttattgcttgccagccactggctaaaaggtgtg
tctcttcaggtatcgattatgtcatccgcagcatggaaaaaccgtccgatcatgcccctg
tttggacaacatttgcaatataatcatcaggcaaaaaagcagtaccatcaatga
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