Xanthomonas oryzae pv. oryzae KACC 10331: XOO2173
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Entry
XOO2173 CDS
T00235
Symbol
GDB1
Name
(GenBank) Glycogen debranching enzyme
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
GDE_C
Bac_rhamnosid6H
Motif
Other DBs
NCBI-ProteinID:
AAW75427
UniProt:
Q5H0U4
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Position
2281213..2284377
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AA seq
1054 aa
AA seq
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MRHLFLRLFAMTAIAAAGAAQAQERVLDGFNDIGAWRLVVSNQVSGSLRPVATPSGGHAL
CLDYNFNGVSGYVGIRRKLPIEYPDNYRLGLVLRGDSPSNDLQLKLIDASGDNVWWVNRP
GFAFPKNWTTVSDRKRNIEKAWGPGQDKQLRRSADVEFTIYNKVGGKGTVCLDRLTLTPL
PPEDTSPLQAKAITDTAPALEQRLADGKPDTFWLSGAVKQQTVTLDLGKVREFGGAIVQW
VPGLQASQYVVRSSSDGRSWRDLRTVTAGAGGTDWLALPDTEARYLRFDLKDGPNWRYGI
KEVQLQPLAFAATPNDFIKSLAAQLPRGSYPRGFSGEQPYWTILGLDGGTEQGLIGEDGA
VEVGKGGFSIEPFVVTGGKVLHWSDVSSEQSLQDDYLPIPSVDWHHDLMNLRVTAFVQGT
PDQAQLVARYQLHNTGKEARDFTLALAVRPFQVNPPAQFLNTLGGVSRIDQLAVDGGQVS
VNGKPRVFAAQRPDAGFASAFDSGMDVSHLTAATPPTVTQVKDETGLASGVLLYRWKLEP
GQRREVALVIPQTGVAQLPAGFDADKAQQQVAQQWRGKLDRVRISVPAEGKPVVDTLRTA
LAHMLISRIGPRLQPGTRSYSRSWIRDGAMISEGLLRLGREDVVRDYVDWFAPYQFADGM
VPCCVDDRGSDPVPENDSHGELIYNIAEYYRYTGDKAFLEQMWPHVSGAYDYMDKLRLSE
RTEDNFMRNPAFYGMMPVSISHEGYSAKPVHSYWDNFWALRGYKDAVMLAGALDKPDAVA
RFSAARDEFRGDLIASLGATVRQHTLDFLPGSAELGDFDATSTTIALTPGGEQQRLPQDL
LTKTFERYWKEFSDRRDGKRDWKDYTPYEWRNVAAFVRLGWRDRAWDATAFFFNDRAPQP
WNQWAEVVSRTPRTPFFVGDLPHAWVASDFVRSVLDMFAYGRESDASLVIAAGTPTRWFE
GKGIGIAELRTPYGRLNYTLQRTDKQLVLQLQPGLILPPGGVVLPWPYQGTPGKATVNGE
SAEWQNGELRIQQLPANVQIDVPSAVRRAERATQ
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcacctgttcctgcgactgtttgccatgaccgccattgccgccgcgggcgcggcg
caggcgcaggagcgcgtgctcgacggcttcaacgacatcggcgcctggcgcctggtggtg
tccaatcaggtcagcggttcgctgcgcccggtggccactccctccggcgggcatgcgctg
tgtctggattacaacttcaacggcgtgtccggctatgtcggcatccgccgcaaattgccc
atcgagtacccggacaattaccggcttggtcttgtgttgcgcggcgactcgccgtccaac
gatctgcagctcaagctgatcgatgccagcggcgataacgtgtggtgggtcaaccggccg
ggttttgccttcccaaagaactggaccacggtcagcgaccgcaagcgcaatatcgaaaaa
gcctggggaccgggccaggacaagcaactgcgccgcagcgcagatgtggaattcaccatc
tacaacaaggtcggcggtaagggcacagtgtgcttggaccgcctgacgctcacgccgctg
ccgccggaagacacctcgccgctgcaggccaaggccattaccgacaccgcgcctgcgctg
gaacagcgcctggccgacggcaagccggacacgttctggctcagcggcgcggtcaagcag
cagacggtcacgttggatctgggcaaggtgcgcgaattcggcggcgccatcgtgcagtgg
gtgccgggtctgcaggcttcgcaatacgtggtgcgctcttccagcgacggacgtagctgg
cgcgatctgcgcaccgtgactgccggcgccggcggcaccgattggctggcgctccccgat
accgaagcgcgctatctgcgtttcgatctcaaggacggccccaactggcgctacggcatc
aaggaagtgcagttgcagccgctggcattcgccgcaacgccgaatgacttcatcaagtcg
ctggctgcacaactgccgcgtggcagttatccgcgcggcttctccggcgagcagccgtac
tggaccatcctgggtctggacggtggtaccgaacagggcttgatcggcgaagacggtgcg
gtggaggtgggcaagggcggtttcagcatcgagccgttcgtggtcaccggcggcaaggtg
ctgcactggtccgatgtcagcagcgagcagagcctgcaggacgactatctgccgattccc
agtgtcgattggcaccacgacctgatgaatctgcgcgtcaccgcgttcgtgcagggcacc
cccgatcaggcgcaactggtcgcgcgttaccaactgcacaacaccggcaaggaggcgcgc
gatttcaccctggcgctggccgtgcgcccgttccaggtcaatccgccggcgcagttcctc
aacaccctggggggcgtcagccggatcgaccaactcgccgtagatggcggccaggtcagc
gtcaatggcaagccgcgggtgttcgctgcacagcgaccggatgccggcttcgccagtgct
ttcgacagcggcatggatgtcagccatctcactgcggccacgccgccgacggtcacccag
gtcaaggacgaaaccggcctggcctcgggggtgttgctgtatcgctggaagctggagccc
ggacaacgccgtgaggtggcgctggtcattccgcaaaccggtgtcgcgcagctgccggct
ggcttcgatgccgacaaagcgcagcagcaggtcgcccagcaatggcgcggcaaacttgat
cgcgtgcgcatcagcgtgcccgccgagggcaagccggtggtcgacaccttgcgcacggcg
ctggcgcacatgctgatttcacgcatcggcccgcgcttgcagccgggcacgcgctcgtat
tcgcgtagctggatccgcgacggcgcaatgatttccgaaggcttgctgcggcttggccgc
gaagacgtggtgcgcgactacgtggattggttcgcgccatatcaatttgccgatggcatg
gtgccgtgctgtgtggacgaccgcggcagcgacccggtgccggagaacgacagtcacggt
gagctgatctacaacatcgccgagtactaccgctacaccggtgacaaggcattcctggaa
cagatgtggccgcatgtcagcggtgcctacgactacatggacaagctgcgcctcagcgaa
cgcaccgaagacaacttcatgcgtaacccggccttctacggaatgatgccggtgtcgatc
agccacgaaggctattcggccaagccggtgcattcgtactgggacaacttctgggcgctg
cgcggttataaggacgcggtgatgctggccggcgcgctggacaagcccgacgccgtcgca
cggttcagcgccgcacgcgatgaattccgtggtgacctgattgcctcgctgggtgcgacc
gtgcggcagcacaccctggatttcctgccgggttcggcagaactaggcgacttcgatgcg
acctcgaccacgattgccttgacgccaggcggcgagcagcaacgtctgccgcaggatctg
ctgaccaagaccttcgagcgctattggaaagagttctccgaccgccgcgatggcaagcgc
gactggaaggactacacgccctacgagtggcgcaacgtggccgcattcgtgcgcctgggt
tggcgcgaccgcgcctgggacgccaccgcgttcttcttcaatgatcgtgcgccgcaaccc
tggaaccagtgggccgaagtggtctcgcgcacgccgcgtacgccgtttttcgtcggcgac
ctgccgcatgcctgggtcgcctcggacttcgtgcgctcggtactggacatgttcgcctac
ggccgcgaatccgatgccagcctggtcatcgctgccggcacgccgacgcggtggttcgaa
ggcaagggcattggcattgccgaactgcgtacaccatacgggcgcctcaactacaccttg
cagcgcaccgacaagcaattggtgctgcagctgcagcccgggctgatcctgccgccgggc
ggcgtggtgctgccgtggccatatcaaggcacaccgggcaaggccacggtcaacggcgag
tcggccgagtggcagaacggcgaactgcgcatccagcaactgcccgccaacgtgcaaatc
gatgtgcccagcgcggtgcggcgggctgagcgcgccacgcaatga
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