Xanthomonas oryzae pv. oryzae KACC 10331: XOO3013
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Entry
XOO3013 CDS
T00235
Symbol
pthA2
Name
(GenBank) avirulence protein
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAL_effector
Motif
Other DBs
NCBI-ProteinID:
AAW76267
UniProt:
Q5GYF4
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All DBs
Position
3219883..3223686
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AA seq
1267 aa
AA seq
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MCTAMRPRKLCRDHRPLVWRRPCKEVCLMDPIRSRTPSPARELLPGPQPDRVQPTADRGG
APPAGGPLDGLPARRTMSRTRLPSPPAPSPAFSAGSFSDLLRQFDPSLLDTSLLDSMPAV
GTPHTAAAPAECDEVQSGLRAADDPPPTVRVAVTAARPPRAKPAPRRRAAQPSDASPAAQ
VDLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVTYQD
IITALPEATHEDIVGVGKQWSGARALEALLTEARELRGPPLQLDTGQLLKIAKRGGVTAV
EAVHAWRNALTGAPLNLTPDQVVAIASNIGGKQALETVQRLLPVLCQDHGLTPDQVVAIA
SNGGGKQALETVQRLLPVLCQDHGLTPDQVVAIASNNGGKQALETVQRLLPVLCQDHGLT
PDQVVAIASNGGGKQALETVQRLLPVLCQDHGLTPDQVVAIANNKGGKQALETLQRLLPV
LCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQDHGLTPAQVVAIASNIGGKQALE
TVQRLLPVLCQDHGLTPDQVVAIANNNGGKQALETVQRLLPVLCQDHGLTPDQVVTIASN
IGGKQALEMVQRLLPVLCQDHGLTPDQVVAIANNNGGKQALETVQRLLPVLCQAHGLTPD
QVVAIASNIGGKQTLETVQRLLPVLCQDHGLTPDQVVAIANNNGGKQALETVQRLLPVLC
QDHGLTPDQVVAIASNSGGKQALETVQRLLPVLCQDHGLTPNQVVAIASNGGGKQALETV
QRLLPVLCQDHGLTPDQVVGIASNSGGKQALETVQRLLPVLCQDHGLTPDQVVAIANNNG
GKQALETVQRLLPVLCQDHGLTPDQVVAIASNIGGKQALETVQRLLPVLCQDHGLTLDKV
VAIASNGGKQALETVQRLLPVLCQDHGLTPDQVVAIASNSGGKQALETVQRLLPVLCQDH
GLTPDQVVAIASNGGGKQALESIVAQLSRPDPALAALTNDHLVALACLGGRPAMDAVKKG
LPHAPELIRRVNRRIGERTSHRVADYAQVVRVLEFFQCHSHPAYAFDEAMTQFGMSRNGL
VQLFRRVGVTELEARGGTLPPASQRWDRILQASGMKRAKPSPTSAQTPDQASLHAFADSL
ERDLDAPSPMHEGDQTGASSRKRSRSDRAVTGPSAQQSFEVRVPEQHDALHLPLSWRVKR
PRTRIGGGLPDPGTPIAADLAASSTVLWEQDAAPFAGAADDFPAFNEEELAWLMELLPQS
GSVGGTI
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtactgccatgcggcctcggaagctatgtagggaccacagaccgctagtctggagg
cgaccatgtaaagaggtatgcctgatggatcccattcgttcgcgcacgccaagtcctgcc
cgcgagcttctgcccggaccccaaccggatagggttcagccgactgcagatcgggggggg
gctccgcctgctggcggccccctggatggcttgcccgctcggcggacgatgtcccggacc
cggctgccatctccccctgcgccctcgcctgcgttctcggcgggcagcttcagcgatctg
ctccgtcagttcgatccgtcgcttcttgatacatcgcttcttgattcgatgcctgccgtc
ggcacgccgcatacagcggctgccccagcagagtgcgatgaggtgcaatcgggtctgcgt
gcagccgatgacccgccacccaccgtgcgtgtcgctgtcactgccgcgcggccgccgcgc
gccaagccggccccgcgacggcgtgcggcgcaaccctccgacgcttcgccggccgcgcag
gtggatctacgcacgctcggctacagtcagcagcagcaagagaagatcaaaccgaaggtg
cgttcgacagtggcgcagcaccacgaggcactggtgggccatgggtttacacacgcgcac
atcgttgcgctcagccaacacccggcagcgttagggaccgttgctgtcacgtatcaggac
ataatcacggcgttgccagaggcgacacacgaagacatcgttggcgtcggcaaacagtgg
tccggcgcacgcgccctggaggccttgctcacggaggcgagggagttgagaggtccgccg
ttacagttggacacaggccaacttctcaagattgcaaaacgtggcggcgtgaccgcagtg
gaggcagtgcatgcatggcgcaatgcactgacgggtgcccccctgaacctgaccccggac
caagtggtggccatcgccagcaatattggcggcaagcaggcgctggagacggtgcagcgg
ctgttgccggtgctgtgccaggaccatggcctgaccccggaccaggtcgtggccatcgcc
agcaatggcggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgc
caggaccatggcctgaccccggaccaggtcgtggccatcgccagcaataacggcggcaag
caggcgctggagacggtgcagcggctgttgccggtgctgtgccaggaccatggcctgacc
ccggaccaggtcgtggccatcgccagcaatggcggcggcaagcaggcgctggagacggtg
cagcggctgttgccggtgctgtgccaggaccatggcctgaccccggaccaagtggtggcc
atcgccaacaataaaggcggcaagcaggcgctggagacgctgcagcggctgttgccggtg
ctgtgccaggcccatggcctgaccccggaccaggtggtggccatcgccagcaatggcggc
ggcaagcaggcgctggagacggtgcaacggctgttgccggtgctgtgccaggatcatggc
ctgaccccggcccaggtcgtggccatcgccagcaatattggcggcaagcaggcgctggag
acggtgcagcggctgttgccggtgctgtgccaggaccatggcctgaccccggaccaagtg
gtggccatcgccaacaataacggcggcaagcaggcgctggagacggtgcagcggctgttg
ccggtgctgtgccaggaccatggcctgaccccggaccaggtcgtgaccatcgccagcaat
attggcggcaagcaggcgctggagatggtgcagcggctgttgccggtgctgtgccaggac
catggcctgaccccggaccaagtggtggccatcgccaacaataacggcggcaagcaggcg
ctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccggac
caggtcgtggccatcgccagcaatattggcggcaagcagacgctggagacggtgcagcgg
ctgttgccggtgctgtgccaggaccatggcctaaccccggaccaggtcgtggccatcgcc
aacaataacggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgc
caggaccatggcctgaccccggaccaggtcgtggccatcgccagcaatagtggcggcaag
caggcgctggagacggtgcagcggctgttgccggtgctgtgccaggaccatggcctgacc
ccgaaccaggtggtggccatcgccagcaatggcggcggcaagcaggcgctggagacggtg
cagcggctgttgccggtgctgtgccaggaccatggcctgaccccggaccaggtcgtgggc
atcgccagcaatagtggcggcaagcaggcgctggagacggtgcagcggctgttgccggtg
ctgtgccaggaccatggcctgaccccggaccaggtcgtggccatcgccaacaataacggt
ggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggaccatggc
ctgaccccggaccaggtggtggccatcgccagcaatattggcggcaagcaggcgctggag
acggtgcagcggctgttgccggtgctgtgccaggaccatggcctgaccctggacaaggtg
gtggccatcgccagcaatggcggcaagcaggcgctggagacggtgcagcggctgttgccg
gtgctgtgccaggaccatggcctgaccccggaccaggtcgtggccatcgccagcaatagt
ggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggaccat
ggcctgaccccggaccaggtggtggccatcgccagcaatggcggcggcaagcaggcgctg
gagagcattgttgcccagttatctcgccctgatccggcgttggccgcgttgaccaacgac
cacctcgtcgccttggcctgcctcggcggacgtcctgccatggatgcagtgaaaaaggga
ttgccgcacgcgccggaattgatcagaagagtcaatcgccgtattggcgaacgcacgtcc
catcgcgttgccgactacgcgcaagtggttcgcgtgctggagtttttccagtgccactcc
cacccagcgtacgcatttgatgaggccatgacgcagttcgggatgagcaggaacgggttg
gtacagctctttcgcagagtgggcgtcaccgaactcgaagcccgcggtggaacgctcccc
ccagcctcgcagcgttgggaccgtatcctccaggcatcagggatgaaaagggccaaaccg
tcccctacttcagctcaaacaccggatcaggcgtctttgcatgcattcgccgattcgctg
gagcgtgaccttgatgcgcctagcccaatgcacgagggagatcagacaggggcaagcagc
cgtaaacggtcccgatcggatcgtgctgtcaccggcccctccgcacagcaatctttcgag
gtgcgcgttcccgaacagcacgatgcgctgcatttgcccctcagctggagggtaaaacgc
ccgcgtaccaggatcgggggcggcctcccggatcctggtacgcccatcgctgccgacctg
gcagcgtccagcaccgtgctgtgggaacaagatgcggcccccttcgcaggggcagcggat
gatttcccggcattcaacgaagaggagctcgcatggttgatggagctattgcctcagtca
ggctcagtcggagggacgatctga
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