Xanthomonas sacchari: SB85_13260
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Entry
SB85_13260 CDS
T03566
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SB85_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_13260
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SB85_13260
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SB85_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
SH3_13
Helicase_RecD
UvrD_C
DEAD
T2SSE
nSTAND3
Herpes_Helicase
SLFN-g3_helicase
AAA_28
AAA_16
ABC_sub_bind
ATPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AJC46579
LinkDB
All DBs
Position
3186991..3188982
Genome browser
AA seq
663 aa
AA seq
DB search
MSQSNLLATLYRTGTLRTLDHAFAHSLSRLDPNTPDLVLAGAALASLAVASGHAGLDPAR
ASLLLDSRDGAAPTLPTADDWTRALAASRWVAQPAAEDPASPDCPLVLEHGLLYLRRYRE
YERRLALGLRRLAAQPLPHNDLAALAPLFAQLFPLPPGEGARRAGEGTAAAYPSDRQAQA
AALALRRALLLVTGGPGTGKTTTIARLLLLRLAQARAAGLPPPRIALAAPTGRAAERMAE
SLRAAVARALADGVDPTLAESLPAGASTLHRLLGVIPDLPRFRHDADNPLPFDLIVIDEA
SMVDLPLMCKLVDAVADGAQLILLGDADQLPSVEAGDVLAAILQAAGPGDALQPDDAKAL
QPLLGHSAVAHDHGGLAGHRVHLLRGYRQAQDFALAPLADAVRSGDADGALRLLRDGQLA
GVHFHDGVDDALAAGGDALLAHWRALGDTDDPAQALRAAARLRLLTAVRAGPQGARGLNA
RIEQLLGETASGARRLGAASPWFHGRLLLITENSYRHGLFNGDVGICLKDAQGTLVAWFD
GAGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFEEVWLQLPARDARVLSRELVYTGITR
ARRALHIAASEPVLRAALARHAARISGLAWRLGGEQQPQSQPLRPAADILPELPSTPIQG
ALF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaatccaacctcctcgccaccctctaccgcaccggcaccttgcgcacgctggac
cacgccttcgcgcacagcctgagccgcctcgacccgaacacccccgacctggtcctggcc
ggcgccgccctggcctcgctggcagtggccagcggccacgccggcctcgacccggcacgc
gccagcctcctgctcgacagccgcgacggcgctgcccccacgctgcccaccgcagacgac
tggacccgcgccctggccgcctcgcgctgggtcgcacaacccgccgccgaagacccggcc
agccccgactgcccactcgtactcgaacacggcctgctctacctgcgccgctaccgcgag
tacgagcgacgcctggccctgggcctgcgccgcctcgccgcacagccgctgccgcacaac
gacctcgccgcgctcgcgcccctgttcgcccagctcttccctctccccccgggagagggt
gcccgcagggcgggtgagggtacggccgccgcctacccatccgaccgccaagcccaagcc
gccgccctcgccctgcgccgcgccctgctgctggtcaccggcggccccggcaccggcaag
accaccaccatcgcccgcctgctgctgctgcgcctcgcccaggcccgcgccgccggcctg
ccgccaccgcgcatcgccctggccgcgcccaccggccgcgccgccgagcgcatggccgag
agcctgcgcgccgcggtggcgcgcgcgctcgccgacggcgtcgaccccaccctggccgag
tccctgccggccggcgccagcaccctgcatcgcctgctcggcgtcatccccgacctgccg
cgtttccgccacgacgccgacaacccgctgccgttcgacctgatcgtgatcgacgaagcc
tccatggtcgacctgccgctgatgtgcaagctggtcgacgccgtggccgacggcgcgcaa
ctgatcctgctcggcgacgccgaccagttgccctcggtggaagccggcgacgtgcttgcc
gcgatcctgcaggccgccggccccggcgacgcgctgcagcccgacgacgccaaggcgctg
cagccgctgctcggccacagcgcggtcgcgcacgaccatggcggcctggcagggcaccgc
gtgcacctgctgcgcggttaccgccaggcccaggacttcgccctggcgccgctggccgac
gccgtgcgcagcggcgatgccgacggcgccctgcgcctgctgcgcgacggccagctcgcc
ggcgtgcacttccatgacggcgtcgacgacgcgctcgccgccggcggcgacgccctgctc
gcgcactggcgcgccctcggcgacaccgacgatccggcgcaggccctgcgcgccgccgcg
cgcctgcgcctgctcaccgccgtgcgcgccggcccgcagggcgcgcgcgggctcaacgca
cgcatcgagcaattgctgggcgagaccgccagcggcgcgcgccgcctcggcgccgcctcg
ccctggttccacggccgcctgctgctgatcaccgagaacagctaccgccacggcctgttc
aacggcgacgtcggcatctgcctgaaggacgcacagggcaccctggtcgcctggttcgac
ggcgccggcgacggccaagtccgcggcttccacccggccgcactgcccgcgcacgaaagc
gccttcgccatgaccgtgcacaaggcccagggcagcgaattcgaggaagtctggctgcag
ttgccggcccgcgacgcccgcgtgctcagccgcgaactggtctacaccggcatcacccgc
gcccgccgcgcgctgcacatcgccgccagcgaaccggtgctgcgcgccgcgctcgcacgg
catgcggcgcggatctcggggttggcgtggcggttgggtggggagcagcagccacagtcg
cagccgttgcggcctgcagccgatatccttcccgaactacccagcacgccgatccagggc
gcgctgttttga
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