Xanthomonas sacchari: SB85_20490
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Entry
SB85_20490 CDS
T03566
Name
(GenBank) fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa00020
Citrate cycle (TCA cycle)
xsa00190
Oxidative phosphorylation
xsa00650
Butanoate metabolism
xsa01100
Metabolic pathways
xsa01110
Biosynthesis of secondary metabolites
xsa01120
Microbial metabolism in diverse environments
xsa01200
Carbon metabolism
Module
xsa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xsa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xsa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SB85_20490
00650 Butanoate metabolism
SB85_20490
09102 Energy metabolism
00190 Oxidative phosphorylation
SB85_20490
Enzymes [BR:
xsa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SB85_20490
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
GIDA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJC48117
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Position
unnamed:complement(505681..507471)
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEDGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGA
CRGVLALDMAEGSLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPMQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSSGERFMERYAPHYKDLASRDVVSRSMTIE
IREGRGVGEHKDHILLDLTHLGPGVIDEKLPGIAESARIFAGVDVHKQPIPVIPTVHYNM
GGIPTNYHGEVVRKDGDNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETIKTGAPHKGLPGDACDKALGLLDKLRNANGSTPTSVIRDKMQRTMQSDAAVFRTS
KTLKEGVDKMADIFASFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHAHEDFPDRDDVNWQKHTLVTVDDKGQCSFDYRPVHMYTLSKDVDVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcaccgaacacaagtacgacatggtcgtggtcggcgccggcggc
gccggcctgcgcgccaccttcggcctggcccagaagggcctgcagacggtctgcctgacc
aaggtcttcccgacccgttctcacaccgtggccgcgcagggcggcatctccgccgcgctc
ggcaacatgggcgaggacgactggcgctaccacttctacgacaccatcaagggctcggac
tggctgggcgaccaggacgcgatcgagtacatgtgccgcgaggcgatcccggcgatcatc
gagctggagcactacggcgtgccgttcagccgcaccgaggacggcaagatctaccagcgt
ccgttcggcggcatgaccaccaagtacggcgaaggcccgtccgcgcagcgcacctgcgcc
gccgccgaccgcaccggccacgccatgctgcacacgctgtaccagcagtcgctggcgcac
aacgcgcgcttcatgatcgagtacttcgcgctcgacctgatcttcgacgaggaaggcgcc
tgccgcggcgtgctcgccctggacatggccgaaggctcgctgcacctgttccgcgcccac
ggcgtggtgctggccaccggcggctacggccgtgcctacttcagcgccacctcggcgcac
acctgcaccggcgacggcggcggcctggtgatgcgcgccggcctgccgatgcaggacatg
gagttcgtgcagttccacccgaccggcatctacggcgccggctgcctgatcaccgaaggc
gtgcgcggcgaaggcggcatcctgcgcaacagcagcggcgagcgcttcatggagcgctac
gcgccgcactacaaggatctggcctcgcgcgacgtggtgtcgcgttcgatgaccatcgag
atccgcgaaggccgcggcgtcggcgagcacaaggaccacatcctgctcgacctgacccac
ctcggcccgggcgtgatcgacgagaagctgcccggcatcgccgagagcgcgcgcatcttc
gccggcgtcgacgtgcacaagcagccgatcccggtgatcccgaccgtgcactacaacatg
ggcggcatcccgaccaactaccacggcgaagtggtgcgcaaggacggcgacaaccccgat
gcggtggtgcctggcctgtacgccatcggcgaggctgcctgcgtgtcggtgcacggcgcc
aaccgcctgggctccaactcgctgctcgacctggtggtgttcggccgcgcggtggccaac
cgctgcgccgagacgatcaagaccggcgcgccgcacaagggtttgccgggcgacgcctgc
gacaaggcgctgggcctgctggacaagctgcgcaacgccaacggcagcaccccgacctcg
gtgatccgcgacaagatgcagcgcaccatgcagtccgacgcggcggtgttccgcaccagc
aagacgctgaaggaaggcgtggacaagatggccgacatcttcgccagctttgaggacgtc
aaggtgtccgaccgctcgctggtgtggaattccgacctgatcgagacctacgagctgaac
aacctgctgctcaacgcggtggcgacgatcaactcggccgaacagcgcaaggaaagccgc
ggcgcgcacgcccacgaggatttccccgaccgcgacgacgtcaactggcagaagcacacg
ctggtcaccgtcgacgacaagggccagtgcagcttcgactaccgcccggtgcacatgtac
acgctcagcaaggacgtggacgtggtgccgccgaagccgcgcgtttactga
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