KEGG   Xanthomonas translucens: FD63_00155Help
Entry
FD63_00155        CDS       T03961                                 

Definition
(GenBank) DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
xtn  Xanthomonas translucens
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:xtn00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    FD63_00155
Enzymes [BR:xtn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FD63_00155
DNA repair and recombination proteins [BR:xtn03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FD63_00155
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
32249..35032
Genome map
AA seq 927 aa AA seqDB search
MTLREYARKRRFGATPEPADDSGAARSRRPIFVVQLHHASSRHYDFRLEADGVLKSWAVP
KGPSLRVGEKRLAVQVEDHPLSYAGFAGDIPEGHYGAGHVDVFDHGTWSCDGEPLAAIAA
GKLDFVLHGERLNGNWKLVRTALRGKQPQWLLIKRDDAFAADREADDLLQDSPAAAAKRA
AKATKATKATKATKATKATKASKASKASKAKPTRSQAPAATAATPAARPRRSDAAWRKRA
LALEGARDHPCPPGARAQLTLLRARAPDGAQWLHEIKWDGYRLLADLDAGQATLRSRNDQ
AWTETFPEVAHAVQALPVREVRLDGELVVLDADGRSDFSALQRVIEGSSRQPLRYLVFDL
LGVAGVDLREVPLLQRKQLLRALLGDTPGVLAYSDHVLGHGPEVFAAAAAKGYEGVVSKR
ADARHHGGRGGDWVKTKHENSDDFVIVGYTDPKGARNGFGSLLLAQRSAGGLRYVGRVGT
GFDESGLRRLLAQLQALHSEQAAVELPAHAPFPRRSVHWVRPQLVAEVAFRGWAKEGLLR
QAAFKRLRADKPLQDLGGDRAPPPQPAAGQGRHAVAARAAASAEKTVPAARGPAKQAKRS
ASNGNAAKNGAAKRKPATAKSAPRASTAAQKTASSASADAAAPAVVITHPERVVYPGAGI
SKGEVAAYYRAIAPWLLQEVAGRPLSLLRCPDGAGGECFFQKHNNRALGQHVQAIALKQK
SGTEDYLYIDDLAGLLELVQMNTLELHPWGATVDDPEHPDRLVFDLDPGEGVSWAQIKAA
AREIRTRLRETGLESFVRLSGGKGLHVVVPIVPDADWERARDFCEAFAQALAGSAPERYV
ATMSKAKRSGVIFVDWLRNGRGNTSVCSWSLRAREHATVAVPLRWEELARIASPQAFPLA
KALQRAARLRAHPWKEMATLEQRLPGS
NT seq 2784 nt NT seq  +upstreamnt  +downstreamnt
atgacgctgcgcgagtacgcccgcaagcgccgtttcggcgcgaccccggaaccggccgac
gacagcggcgcggcgcggtcgcggcggccgatcttcgtcgtgcagctgcaccacgccagt
tcgcgccattacgatttccgcctggaagccgatggcgtgctgaagagttgggcggtgccg
aagggtccgtcgttgcgggtcggcgaaaagcggctggcggtgcaggtggaagaccatccg
ctgtcctatgccggtttcgccggcgacattcccgagggccattacggcgccggccatgtc
gatgtgttcgatcacggcacttggtcgtgcgacggcgagccgctggccgcgatcgccgcc
ggcaagctggatttcgtactgcatggcgagcgcctcaacggcaactggaaactggtgcgc
accgcattgcgcggcaagcagccgcagtggctgctgatcaagcgcgacgacgcgttcgcc
gccgatcgcgaggccgatgacttgctgcaggattcgccggcggcggctgcgaagcgcgcc
gccaaggcgaccaaggcgaccaaggcgaccaaggcgaccaaggcgaccaaggcgaccaag
gccagcaaggccagcaaggccagcaaggcaaaacccacgcgcagccaagcgcccgccgca
actgccgcaacacccgccgcacggccacggcgcagcgacgcggcctggcgcaagcgcgcg
ctggcgctggagggtgcgcgcgatcacccgtgtccgccaggcgcgcgcgcgcagctgacg
ttgctgcgcgcgcgcgcgcccgacggcgcgcaatggctgcacgagatcaagtgggacggc
taccgcctgctcgccgatctggacgccggccaggcgacgctgcgctcgcgcaacgaccag
gcctggaccgagaccttccccgaagtcgcacacgcggtgcaggccttgccggtgcgtgag
gtgcggctggacggcgagctggtggtgctcgatgccgacggccgcagcgatttctccgcc
ttacaacgggtcatcgagggcagctccaggcaaccgctgcgctacttggtgttcgacctg
ctcggcgtggccggcgtggacctgcgcgaggtcccgctgctgcagcgcaagcaattgctg
cgcgcgctgctcggcgacacgccgggcgtgctggcctatagcgaccacgtgctcggccat
ggcccggaggtgttcgccgccgcggcggcgaagggctacgaaggcgtggtcagcaagcgc
gcggacgcgcgtcatcacggcggccgcggcggcgactgggtcaagaccaagcacgagaac
agcgatgatttcgtcatcgtcggctataccgatcccaagggcgcgcgcaacggcttcggt
tcgctgctgctggcgcagcgcagcgctggcgggttgcgctacgtcggccgtgtcggcacc
ggtttcgacgaatccggcctgcggcggttgcttgcgcagctgcaggcattgcacagcgag
caggcggcggtggagcttcccgcgcatgcgccgttcccgcggcgcagcgtgcactgggtg
cggccgcagctggtggccgaagtcgctttccgtggctgggccaaggaagggttgttgcgc
caggccgcgttcaagcgcctgcgcgcggacaagccgctgcaggatcttggcggcgatcgt
gcgccgccaccacagccggcggcaggccagggccgccatgccgtggcggcgcgcgctgcg
gcatcggcggagaagaccgtgccggccgcgcgcgggccggccaagcaggcgaaacgcagc
gcgtcgaacggcaatgccgcgaaaaacggcgccgccaagcgcaaaccggcgaccgccaag
tccgcgccgcgcgcaagcaccgcggcgcagaagaccgcgtcctctgccagcgccgatgcc
gcggccccggcggtcgtcatcacccaccccgagcgcgtcgtgtatccgggcgccggcatc
agcaagggcgaggtcgccgcgtactaccgcgccatcgcgccatggctgctgcaggaagtc
gccgggcggccgctgtcgctactgcgctgccccgatggcgccggcggcgaatgcttcttc
cagaagcacaacaaccgcgcgctcggccagcacgtgcaggcgatcgcgctgaagcagaag
agcggcaccgaggactacctgtacatcgacgatctggccggcctgctggaactggtgcag
atgaacaccctggagctgcatccctggggggcgaccgtggacgatcccgagcaccccgac
cggctggtgttcgatctggacccgggcgagggcgtgagctgggcgcagatcaaggccgcc
gcgcgcgagatccgcacccgcctgcgcgagaccgggctggagagtttcgtgcgcctgtcc
ggcggcaagggcctgcacgtggtggtgccgatcgtgcccgacgcggactgggagcgcgcg
cgcgatttttgcgaagccttcgcccaggcgctggctgggtccgcgcccgagcgctacgtg
gccacgatgagcaaggccaagcgcagcggggtgatcttcgtcgattggctgcgcaacggc
cgcggcaacaccagcgtgtgctcgtggtcgctgcgcgcgcgcgagcacgccaccgtggcg
gtgccgctgcgctgggaggaactggcgcggatcgcctcgccgcaggcgttcccgctggcc
aaggcgctgcagcgcgccgcgcgcctgcgcgcgcatccgtggaaggagatggcgacgcta
gagcagcggttgcctgggagctga

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