Xenopus tropicalis (tropical clawed frog): 100125026
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Entry
100125026 CDS
T01011
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136
Autophagy - other
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100125026 (atg13)
04136 Autophagy - other
100125026 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100125026 (atg13)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100125026 (atg13)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100125026 (atg13)
Atg1 complex
100125026 (atg13)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100125026 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100125026
NCBI-ProteinID:
NP_001096420
Xenbase:
XB-GENE-960599
UniProt:
A4IIM9
LinkDB
All DBs
Position
4:complement(12997383..13024058)
Genome browser
AA seq
510 aa
AA seq
DB search
MDTDLSPQDRKDLDKFIKFFALKSVQVIVQARLGDKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEVWCLEMNEKCDRDIKVSYTVYNR
LSLLLKSLLAVTRVTPAYRLSRKQGHEYVILYRIYFGDVQLLGLKEGFQAVRVGTVGTPV
GTLTLTCAYRTNLAFMSTRQYEWTQPIMGIIIDHFVDRPFPSTSHMHPCNYRGAEEQVLT
YPAVEESQEVCTTSFSTSPPSQLCSSRLSYQPAVPGAGPSELGYPVALATGVSAGHPHQM
MAPGKESGLPAVSVQPAHGNQAEHDRTLSVSPANVAGTTSSSEEADSPSGSSTTGAKSSP
NKNTHVLFTRKVGAFVDKPSPQVTYASTDIPFAVFVPKLADNEDTDPMVVYPETPEEESP
EARSLHSSCSSSGTPQDDFVMVDFKPAFSKDDLPMDVGTFYREFQNPPQLSSLSIDIAVQ
SMAEDLDSLPEKLAMHEKNMKEFDAFVDSL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacctcagcccccaggaccggaaggacttggacaagtttatcaaattcttt
gcgctaaagagcgttcaggtgattgtacaagctcgactcggagataagatctgcactcgc
tcctcctcatctcctacaggctcggactggttcaacttggccatcaaggatatcccagag
gtgacccatgaagcaaagaaagctctatcagggcagctgcctgcagtgggacgttccatg
tgtgtggagatttctctgaagacatcagagggagattccatggagcttgaagtctggtgt
ctggaaatgaatgaaaagtgtgaccgagacattaaggtctcctatactgtatataacaga
ttgtcattgctgctaaagtcattacttgctgtcaccagagtgaccccagcttacagactc
tccaggaagcaaggacatgaatatgtcattctatacaggatttactttggagacgttcag
ctcctcggacttaaggaaggtttccaggctgtacgggttggaactgttggaacaccagtc
ggaacactcacacttacatgtgcctacagaaccaacctggcttttatgtcaaccaggcag
tatgagtggacccagcccatcatggggattataattgatcactttgttgaccgacccttc
cccagcacctcacacatgcatccctgcaactacaggggcgctgaagagcaagtgcttacc
taccctgcagtggaggagtctcaagaagtctgcacaacatcgttttccacttcccctcct
tcacagctctgcagctctcgcctctcctatcaaccagctgtgccaggagcaggaccctcc
gaactgggttacccagtggccttggctactggagtgagcgcaggccatccgcaccagatg
atggcaccaggaaaagaaagcggtttgcctgctgttagtgttcagcctgcccacggaaac
caggcagagcatgaccggaccctgtctgtgtctcccgccaatgtagcagggacaacatcc
agcagcgaggaagcagactccccctcaggtagcagcaccactggggcaaaaagctcgccc
aacaagaacacccatgtactatttacaaggaaagtgggagcttttgttgataaaccttcc
ccccaggtcacctatgccagtactgatataccgtttgccgtgtttgtgccaaagcttgca
gacaatgaggacactgaccctatggttgtctaccctgagacccccgaagaggagtcgcct
gaagccaggagcctgcacagttcctgttccagcagtgggacaccccaagatgattttgtg
atggtcgactttaaacctgccttctccaaagacgaccttcccatggatgtggggaccttc
taccgggagttccagaaccccccacagctaagcagcttatccatagatatcgctgtgcag
tcgatggcagaggacttggactctctgccggagaaactggccatgcacgaaaagaacatg
aaagagtttgatgcatttgttgattctctgtag
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integrated database retrieval system