KEGG   Xenopus tropicalis (tropical clawed frog): 100125026
Entry
100125026         CDS       T01011                                 
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13
  KO
K08331  autophagy-related protein 13
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136  Autophagy - other
xtr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100125026 (atg13)
   04136 Autophagy - other
    100125026 (atg13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100125026 (atg13)
   03029 Mitochondrial biogenesis [BR:xtr03029]
    100125026 (atg13)
Membrane trafficking [BR:xtr04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    100125026 (atg13)
   Atg1 complex
    100125026 (atg13)
Mitochondrial biogenesis [BR:xtr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    100125026 (atg13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 100125026
NCBI-ProteinID: NP_001096420
Xenbase: XB-GENE-960599
UniProt: A4IIM9
LinkDB
Position
4:complement(12997383..13024058)
AA seq 510 aa
MDTDLSPQDRKDLDKFIKFFALKSVQVIVQARLGDKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEVWCLEMNEKCDRDIKVSYTVYNR
LSLLLKSLLAVTRVTPAYRLSRKQGHEYVILYRIYFGDVQLLGLKEGFQAVRVGTVGTPV
GTLTLTCAYRTNLAFMSTRQYEWTQPIMGIIIDHFVDRPFPSTSHMHPCNYRGAEEQVLT
YPAVEESQEVCTTSFSTSPPSQLCSSRLSYQPAVPGAGPSELGYPVALATGVSAGHPHQM
MAPGKESGLPAVSVQPAHGNQAEHDRTLSVSPANVAGTTSSSEEADSPSGSSTTGAKSSP
NKNTHVLFTRKVGAFVDKPSPQVTYASTDIPFAVFVPKLADNEDTDPMVVYPETPEEESP
EARSLHSSCSSSGTPQDDFVMVDFKPAFSKDDLPMDVGTFYREFQNPPQLSSLSIDIAVQ
SMAEDLDSLPEKLAMHEKNMKEFDAFVDSL
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggataccgacctcagcccccaggaccggaaggacttggacaagtttatcaaattcttt
gcgctaaagagcgttcaggtgattgtacaagctcgactcggagataagatctgcactcgc
tcctcctcatctcctacaggctcggactggttcaacttggccatcaaggatatcccagag
gtgacccatgaagcaaagaaagctctatcagggcagctgcctgcagtgggacgttccatg
tgtgtggagatttctctgaagacatcagagggagattccatggagcttgaagtctggtgt
ctggaaatgaatgaaaagtgtgaccgagacattaaggtctcctatactgtatataacaga
ttgtcattgctgctaaagtcattacttgctgtcaccagagtgaccccagcttacagactc
tccaggaagcaaggacatgaatatgtcattctatacaggatttactttggagacgttcag
ctcctcggacttaaggaaggtttccaggctgtacgggttggaactgttggaacaccagtc
ggaacactcacacttacatgtgcctacagaaccaacctggcttttatgtcaaccaggcag
tatgagtggacccagcccatcatggggattataattgatcactttgttgaccgacccttc
cccagcacctcacacatgcatccctgcaactacaggggcgctgaagagcaagtgcttacc
taccctgcagtggaggagtctcaagaagtctgcacaacatcgttttccacttcccctcct
tcacagctctgcagctctcgcctctcctatcaaccagctgtgccaggagcaggaccctcc
gaactgggttacccagtggccttggctactggagtgagcgcaggccatccgcaccagatg
atggcaccaggaaaagaaagcggtttgcctgctgttagtgttcagcctgcccacggaaac
caggcagagcatgaccggaccctgtctgtgtctcccgccaatgtagcagggacaacatcc
agcagcgaggaagcagactccccctcaggtagcagcaccactggggcaaaaagctcgccc
aacaagaacacccatgtactatttacaaggaaagtgggagcttttgttgataaaccttcc
ccccaggtcacctatgccagtactgatataccgtttgccgtgtttgtgccaaagcttgca
gacaatgaggacactgaccctatggttgtctaccctgagacccccgaagaggagtcgcct
gaagccaggagcctgcacagttcctgttccagcagtgggacaccccaagatgattttgtg
atggtcgactttaaacctgccttctccaaagacgaccttcccatggatgtggggaccttc
taccgggagttccagaaccccccacagctaagcagcttatccatagatatcgctgtgcag
tcgatggcagaggacttggactctctgccggagaaactggccatgcacgaaaagaacatg
aaagagtttgatgcatttgttgattctctgtag

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