Xenopus tropicalis (tropical clawed frog): 100144701
Help
Entry
100144701 CDS
T01011
Symbol
krt78.9
Name
(RefSeq) keratin 78, gene 9
KO
K07605
type II keratin, basic
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100144701 (krt78.9)
04147 Exosome [BR:
xtr04147
]
100144701 (krt78.9)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100144701 (krt78.9)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100144701 (krt78.9)
Exosomal proteins of other body fluids (saliva and urine)
100144701 (krt78.9)
Exosomal proteins of colorectal cancer cells
100144701 (krt78.9)
Exosomal proteins of bladder cancer cells
100144701 (krt78.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
AAA_13
TPR_MLP1_2
Bap31_Bap29_C
DUF4407
DUF1192
Nuf2_DHR10-like
TMF_DNA_bd
DUF1664
Tup_N
ADIP
COG6_N
ATG14
T3SS_needle_E
Motif
Other DBs
NCBI-GeneID:
100144701
NCBI-ProteinID:
NP_001166034
Xenbase:
XB-GENE-920130
UniProt:
B1H309
LinkDB
All DBs
Position
2:147873760..147879391
Genome browser
AA seq
577 aa
AA seq
DB search
MSFSQVSVKKHHSGSGGGGRGGFSACSLGAIGGGSRSGGSYGSRSVYNLGGKSRTSISAA
STRSMAGGLGSAAGGGFGSAAGGGFGSAAGGGFGGGAGGGFGGGFGGGHGGGAGGMGGMG
GPGFDGGDMGFPVCPPGGIQQVTINTQLLQPLNLTIDPNVQKVKTEEREQIKTLNNKFAA
YIDKVRFLEQQNKVLETKWKLLQEQGTKGSTKRANLEPLFEKYIGDLNKYLSTLINEKDR
LTQELKNLQVLVEDYKKKYEDEITKRTKAENDFVLLKKDVDTVYMAKTELEAKVDAVTSE
INFLRTLYAAELSQVHDTVTDTSVVLTMDNNRDLNLEGIIKDVKAQLELCAQRSKMEAEA
LFDNKYKELQKTAEGHGDSIKNSKSEIAELNRRIQRLKAEIENIKKQIAGLNQSIAGAEE
KGNLALKDAEKKLQDLEAAEKKLKEDMARQLKEYQELLAAKIALDVEIGTYGLMLGGEEH
RMSGDIVSNVSISVISGGASVYSALGAAAGGMGGGGMGGGMGSGHGGGYGHGGGFGSGHG
SGHGGGFGAGHGSGHGGGHGKTSVAIASTTSTSKKSY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcacaagtctctgtcaagaagcaccatagtggtagtggtggtggtggaaga
gggggttttagcgcttgctcacttggagcaattggaggaggatctcggtctggaggtagc
tatgggtcacgcagtgtctataaccttggtggaaaatctagaacttccataagtgcagcc
agtactcgaagtatggcaggaggacttggtagtgctgctggaggaggatttggtagcgct
gctggtggaggatttggtagtgctgctggtggaggatttggtggtggtgctggtggagga
tttggtggtggctttggaggaggacatggtggtggtgcagggggcatgggtggcatggga
ggcccaggatttgatggaggggatatgggattccctgtttgcccacctggtggaattcag
caggttactatcaatacacaacttctgcagccacttaatctgactatagatccaaacgtc
cagaaagtaaaaacagaggaaagagaacaaattaaaactctcaacaacaagtttgcagct
tacattgacaaggtcagatttctggaacagcaaaacaaagtcctagaaacaaaatggaaa
ctgctgcaggaacagggaactaagggcagcaccaaaagggccaacctagagcccctgttt
gagaaatacattggcgacctgaacaaatatttaagcactctaataaatgaaaaggaccgt
ttgactcaagaactgaagaatctgcaagttcttgtagaggattataagaaaaaatatgag
gacgaaattaccaagcgtacaaaagcagaaaacgattttgtgttacttaagaaggatgtt
gatactgtctacatggctaaaacagaacttgaggccaaggtggatgcagtgacaagtgaa
atcaacttcttaagaactctttatgctgcggaattgtcacaggtacatgataccgtcacc
gacacctctgttgttctgactatggataacaaccgtgacttgaacctggaaggtatcatt
aaggatgttaaagcacaattagaactatgtgcacaaagaagcaaaatggaagctgaagca
ttgtttgataataagtacaaggagctgcagaaaacagctgaaggacacggggacagcata
aagaattccaaatctgaaatagcagaactgaaccgtaggattcagaggctgaaggctgaa
attgaaaatatcaagaagcagattgcaggtctgaatcaatccattgctggagctgaagaa
aagggcaaccttgctctcaaggatgcagaaaagaaacttcaggatcttgaagctgctgaa
aagaaacttaaggaggacatggctcgtcagcttaaagagtaccaagaacttctggctgct
aagattgcactggatgttgaaattggcacttacggactcatgctgggaggagaagagcac
agaatgtctggagatattgtcagcaacgtcagcatatctgtaatcagcggaggtgccagt
gtatacagcgctcttggtgctgcagcaggcggaatgggaggaggtggaatgggaggaggc
atgggatctggccacggtggtggatatggccacggaggaggctttggatccggccatgga
tccggccacggaggaggctttggagcaggccatggatccggccacggaggaggccacggc
aaaacctcagtggcaattgcatcaacaacatccacgtctaagaaatcctattaa
DBGET
integrated database retrieval system
