Xenopus tropicalis (tropical clawed frog): 100488125
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Entry
100488125 CDS
T01011
Symbol
ccnt2
Name
(RefSeq) cyclin-T2 isoform X1
KO
K15188
cyclin T
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100488125 (ccnt2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100488125 (ccnt2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
100488125 (ccnt2)
Brd4/P-TEFb complex
100488125 (ccnt2)
7SK RNP complex
100488125 (ccnt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
100488125
NCBI-ProteinID:
XP_002941467
Xenbase:
XB-GENE-5963189
UniProt:
A0A8J0QY45
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All DBs
Position
9:complement(84414305..84447135)
Genome browser
AA seq
724 aa
AA seq
DB search
MMADCRAPDSRWFFTREHLETSPSRKCGVEADKELSYRQQAANLIQDMGQRLNVSQLTIN
TAIVYMHRFYMHHSFTKYHRNVMSPTALFLAAKVEEQPRKLEHVIKVAHACLNPVEPQLD
TKSEGYLQQAQELVTLETVLLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATN
SLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDQSVTLELLDELTHE
FLQILEKTPSRLKRIRNWRANQAARKPKSDGQLDNSLLGSSLVQNSILVDPVSGMAATAS
FPKASTSFPAPVALNSGNLPLQTSHNPEEMALLTSTMPSTSYNMGSHHEWPQHQEQHRTD
QIYSQKPEGALQVPQYFQQGAVQIHSGLHHRSDKGSEHSAVKSEHAHKSSSGKHHAQVYA
PSLAISHKMSLDKYREKRKLETVELDSRDQYPPGHEQHKKHSQAAASGPVTSPIKMKIPL
ANEKTEKHSSDKKDKAGSLKLRIPIPPTERGASKEDLKMKIKVSSADRHSSSDEGSGKSK
HSSPHVSKEHKERHKEHSSNRHHSSSHKHSHSHNFGSNNSSNKLSMDGLQPTVLRSPVAL
PSDGSSSSSSSSRKRPHSNDASYNHHSKMSKSSKTSGSSTSSSSVKQYISSHNSVLNHPL
PPPPPVTYQVGYGHLSTLVKLDKKPVESNGPDASHEYGANSQHMDYKDTFDMLDSLLSAQ
GMNM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggactgccgagcgccggactctcgctggttcttcacccgggaacacttggag
accagcccgtctaggaagtgcggcgtggaggcggacaaggaattatcgtaccgccagcaa
gccgccaacttgatccaggacatggggcagcggctgaatgtatctcagctgaccataaat
accgccattgtttacatgcacagattctatatgcatcattcttttaccaaataccacaga
aatgtaatgtctcctactgcattgttcctggctgccaaagtagaagaacagcctcgaaaa
cttgaacatgttataaaagtggcccatgcctgtcttaaccctgtagagccacagctggac
acaaagagtgaaggttacttacaacaagcgcaagaactggtaacacttgaaactgtattg
ttgcagaccttaggttttgagatcactatcgagcatccccatacagatgtcgtaaaatgt
acccaattagtaagagcaagcaaggatttggcccagacatcctatttcatggctaccaac
agcctgcacctcactacattctgccttcaatacaagccaacagtaatagcatgtgtatgc
attcacctggcctgcaagtggtccaactgggagatcccagtttcaacagatgggaaacac
tggtgggaatacgtggaccagtctgttacattagagcttctagatgagttaacgcatgaa
tttttgcaaatattggagaaaactcctagtagattaaagaggattcgaaactggagggca
aaccaggctgcccggaaaccaaaatctgatggccagcttgataattccctccttggttca
tccctggtacagaattccattttagtggatccggtatctggcatggctgcaaccgcaagc
tttcccaaggcgtctacttcgtttccagctccagtagctttgaactcagggaacctgcct
ctccagacaagtcacaatcccgaggaaatggcactactgacttctacaatgccaagtaca
tcttataatatggggtctcatcatgaatggcctcaacatcaagagcagcataggactgac
caaatttatagccagaaaccagagggtgcccttcaagttccacagtactttcagcaaggg
gctgtacagattcactctgggctacatcataggtctgacaaaggttccgaacattctgct
gttaaatcagaacatgctcataaatccagcagtggcaagcatcacgcacaggtctatgct
ccatcactggctatatcacacaaaatgtcattggacaagtatagggagaaacggaagctt
gaaacggtggaacttgattcaagggaccaatatcctccaggccacgagcagcacaaaaag
cacagccaagcagctgcaagcggccctgtaacatctcctatcaaaatgaaaattcccctt
gcaaacgaaaagactgagaaacactcgtccgataaaaaggataaagctgggtctcttaaa
ttgcggatacctatcccgcccacggaaagaggcgcaagcaaagaggacttgaaaatgaaa
atcaaagtttcttcggcagacagacacagctcgtccgatgagggcagtgggaagagcaaa
cactctagtccgcacgtgagcaaggaacacaaagagaggcacaaagagcattcttccaac
aggcaccacagtagcagccacaagcattcccattcacataactttgggagcaacaatagt
agcaataagcttagcatggatggattgcaaccaaccgtgttgaggagtcctgttgccctg
cctagtgatggcagcagctctagctccagctcttcaagaaagaggccgcattccaatgat
gcctcatacaaccaccactccaaaatgagcaaaagttccaaaacttcaggtagttctact
agttcttcctctgttaagcagtatatatcctctcacaactctgttcttaaccatccctta
ccccctcctccccctgtcacataccaggtgggctacgggcatctcagcaccctcgtgaaa
ctggacaagaagccagtggagagcaacggccctgatgccagtcacgagtacggtgcaaac
agccagcatatggactacaaagatacattcgacatgctggattccctgttaagtgcccaa
ggaatgaacatgtga
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integrated database retrieval system
