Xenopus tropicalis (tropical clawed frog): 100489649
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Entry
100489649 CDS
T01011
Symbol
tnxb
Name
(RefSeq) tenascin-X isoform X1
KO
K06252
tenascin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100489649 (tnxb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100489649 (tnxb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100489649 (tnxb)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100489649 (tnxb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_2
Fibrinogen_C
EGF_Tenascin
hEGF
EGF
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
100489649
NCBI-ProteinID:
XP_031747219
Xenbase:
XB-GENE-481849
UniProt:
A0A8J1INR0
LinkDB
All DBs
Position
8:complement(73719387..73761277)
Genome browser
AA seq
2840 aa
AA seq
DB search
MPSFLPLLFFILFFKGCLAPPSTSTQCPDAGGVRALLKRLEILEKLVRDIKGQCSPPCCG
NVQSGADDPASHKSPSCPQPAESCPGGCGGEEHGICIDGQCQCKDGYMGENCQLKTCPED
CNDQGRCKDGQCFCFSGYFGVDCSSKSCPNNCQNHGRCDKGVCICDPGFTGVDCSSRTCP
KNCFNRGRCEDGVCICYPDYTGPDCSIKTCLNDCQDHGRCEDGMCVCDPGFTGIDCSSRT
CHNDCQNHGRCENGLCVCDSGYSGPDCGIMSCPEDCNEQGRCVSGVCVCDSGFIGPDCGT
RVCSPECERRGRCEDGECICNPGFTGPDCEIKTCPNDCHKQGMCVDGKCVCDSGYTGVDC
QVKTCPNKCHNRGRCEDGICICNSGYSGSDCGSKSCPKNCSGNGQCVKGKCVCDSGFIGP
VCGTRACPAGCGNHGRCLRGTCVCSPGYTGVDCASRLCPKNCHNRGRCEQGVCICNPEYT
GLDCGSRTCPKNCHGKGQCDDGVCICDLGYTGLDCATKSCFNDCHHRGRCEDGVCICDVG
YTGLDCGTLSCPKDCHNRGKCENGVCVCDPGFTGLDCGSRSCPNNCNYHGRCEDGECICD
SGYTDHDCGSKMCSNNCQNHGICDNGKCICDSGYAGVDCGLRTCPNDCNNRGQCIDGVCI
CNSGYTDLDCGFRTCPFECHNRGQCVNGICICDSGYSGLDCGSASCPNNCQNRGKCHNGE
CVCDFGYTGVECGTEACPENCHIHGRCEQGVCICQPGYTGLDCSSKSCPKNCSGNGQCIN
GKCICDFGYTGPVCGSRACPGNCGGRGKCINGVCVCKKGYEGADCSVVVTELVAVTGLRV
TSVEESSVTIEWDLQQTPPDVYAISFKAKKENGLLNNTVDGTLTSFVQTGLASGEEYLVS
IQPQKGLTVGPETTVTATTSIEAPLGLRVTEITTTSFLLRWERPQSFPDRYIVTLVSPTG
KERKLKVPGKGDRVRVTALEEGTIYKVILRAERGQEQSKGMETTAKTALDRERKNIDDED
ARKKKGKVVTPQQGGQLEKPRFSEDHYRPATTGQVLIHSGGGEGSSKTREITEYIVEDQT
QKGVVNTTRKTIQTTIITTYHIQNHKEGDVVDMFEDTKSSEYSQTKHLPDRKKISSDVEG
SDVGETTGQTDITGTIIRKHTPEKKVQSWIARGKIIDASSVEKPPNHLTQKTNKTSVQLG
DTQAAGQQRKKPSDKSVEVVTGIQVNLGSTESKTFSDEKLPLTINEKQLENLKDERDPGS
ILDDVSTKVHTEGRNSRKNNTGLEKKRLDAGVRVQKQNKMEKLYPGGLHIKAVIENLPTK
LSVYNGTFIQRLESYLRSTSYPLRANQTVESVARAIFLYLVKYKPNSFTGMVYDRLPQKT
PDSPENEEPFGASKIQGNMGSVMVDNKPDQAKEVVVLRPKDRHATMEGSQRKVDTPAISR
YTSSSELYEVNMKVLKETPTSREEEKLISEKSTLQRLPLKTQLNKTYSEKISDSTKRTIV
PDNQRVWQAGEKDKTFTGKNKNESLKKTTVSPTTMEYLIYTPSVDTLNRPTQSSEDKTAP
GVILLTNDKGITPKKQPYYGKKVPPRPEKVGSKIKEGEIKNERLIDKDSRSKILDDKASL
LQAREGEEKENEEKTIQALGSAGPSTHPTSVKISGPGIFGRPTVVKSTPTNLVVSLDGLG
VLLDKVMIHYRPFQAIMTDMPQQLEVGKGVGKVVIRDLEPGTTYRLEIHGLLRGQSSKSY
ILVADTAQSPTILPTEVTTKPTISPIEDILTTTASSATTRPRIPVQMGALQVRNVTSESI
TLVWKAKIGAYDSFLVRYDEVTDGVSPQELSVPGDQREVTLRGLTQDTRYEVLLYGIREG
KLTRPFKEEVTTEPHPKRGTPPRLSPLLVSEVHRNSALLSWEPLDGDFDAYILRYGSPEG
PMQEETLRGDQTSFLISGLVAAVNYSVELRGIWGESYTEPQATYVLTEKPQPPRLESLTL
FDVRSESLNLSWDVQGGDFDSFLLWYRDGEGKPQEIALDKDLRSSTVRDLKPGKKYKFVL
YGISGEKRSKPVTAEGSTDKLQQPQLESLSVSDVHSDSVLLSWVVQGGKFDSFLLNYRDA
EGKPKEASLEGEQRSVPVGDLKPGKKYKFVLYGISGGKKSKAAIAETTTKPREKVVPSSP
ATPTIPRLVDLQANEIGKDSVNLSWRVEGESSFDWIVVQYGGPDGVVREQQVPGGDTSTL
VTGLLPSRRYKFSLYGIKGQKHSKPLSTEIETGFLEAVGQPSSFLNDLFVSPHGPHSILV
SWQAPEGSFDSFVIRYGIEGHEKPQKEASVNGTARTLLLANLQPDTPYKVKLHGVRRGKE
QGSLETTGRTGSLDLEPPQNLRFNDVEETSLTVSWDPPNPETTTFKVSYQLAKGGEPESV
NVVGDSKSLQRLNVGTRYEVTVVSVRGFEESQPLTGYITTGGGGPHSLHAHDVTEESALL
RWEPEPGFVDRYVVTYRAENVLSVTHEVPGDQTELPISGLNPHTEYYASVQSLHGSKLSS
PTSTSFITSADTPRELLASQITAQSALLTWKPPQVVPDGYRLVYQTHDGEIKELILLANL
SSFTLSHLTPSTPYKVQLHALRGASSSAPISTSFTTGRIRYPFPRDCWEKHMNGDLQSGV
FTIYLGGSKDDPLLVYCDMETDGGGWIVFQRRIDGRTDFWRNWRQYKEGFGNLTSEFWLG
NIALHRLSSLAPYELRVDLRAGAEAAYAVYEDFRVEGEDKHFRLRIGAYRGNAGDSLSYH
NNMIFSTRDRDAEKRILPCSISYRGAWWYKNCHYANLNGMYGNNKDHQGVNWHTWKGFEF
SIPFTEMKMRPQRTGNWRRL
NT seq
8523 nt
NT seq
+upstream
nt +downstream
nt
atgccctctttcctgcctctgctcttcttcattttgtttttcaagggttgtctggcccct
ccatccacatcaactcaatgtccagatgcaggaggggtgcgagctctcctcaagcgactt
gaaattttggaaaagttggttcgggacataaaaggacagtgttcacctccatgttgtgga
aatgtgcagagtggagctgatgaccctgcaagtcacaaatctccttcatgtccacagcca
gccgaatcatgccctgggggttgtggaggggaagaacatggaatctgcattgatggacag
tgtcagtgcaaagatggatacatgggagaaaactgccagctgaaaacttgtcctgaagat
tgtaatgaccaaggtcgatgcaaagatggccaatgcttctgcttttctggatactttgga
gttgattgtagctcaaagtcctgtcctaataattgtcaaaatcatggacgctgtgataaa
ggagtttgtatttgtgaccctggttttactggagttgactgtagttccagaacctgcccc
aaaaactgtttcaatagaggtcgatgtgaagatggagtatgtatatgttaccctgattat
accggtcctgattgcagcattaaaacttgccttaacgactgtcaagaccatgggcgttgt
gaagatggaatgtgtgtgtgtgatcctggattcactggaatagattgtagttccagaact
tgccacaatgactgtcagaatcatggcagatgtgaaaatggactttgtgtttgtgattct
gggtattctggaccagattgtggaattatgagctgcccagaagattgcaatgagcagggc
cgctgtgtgtctggagtctgtgtatgtgatagtggttttattgggccagattgtggaact
agggtctgttctcccgaatgtgagagacgtggtcgttgtgaggatggtgagtgtatctgt
aaccctggatttactggcccagactgtgagataaaaacttgccctaatgattgtcacaaa
caaggaatgtgtgtggatggaaaatgtgtttgtgattctggatatacaggagtagactgc
caagttaaaacttgcccaaacaaatgtcacaaccggggtaggtgtgaagatggaatctgc
atttgtaattctggatattctgggtcagattgtgggtcaaaatcttgtccaaagaactgc
agtgggaatggccaatgtgtgaagggcaagtgtgtatgtgattctggatttattggccca
gtttgtgggaccagagcttgtccagctgggtgtggcaatcatggacgctgtttgagaggg
acctgtgtctgctctccagggtacactggggtagattgtgcatctaggctatgccccaaa
aactgccataaccgaggcaggtgtgaacagggagtctgtatatgtaatcctgaatataca
ggccttgattgtggatctaggacttgccccaaaaactgccacggtaaggggcaatgtgat
gatggtgtgtgtatttgtgacttgggatatactggcttggattgtgcaactaaatcctgc
ttcaatgactgccaccatagggggcgttgtgaagatggtgtgtgtatttgtgatgttgga
tatacaggcctagattgtggaactctaagctgtcctaaagactgccacaacaggggtaag
tgtgaaaatggagtctgtgtctgtgatcctggctttactggcctagattgtggttcaagg
agttgtcctaataattgtaattaccatggtcgatgtgaagatggagagtgtatttgtgat
tctggatatactgatcatgactgtggttcaaaaatgtgttctaataactgtcaaaaccat
ggtatttgtgataatgggaaatgcatctgcgattctggatatgctggtgtagactgtgga
ttgcgaacctgtccaaatgactgcaacaacaggggacagtgtatagatggagtttgcatt
tgtaactctggatacactgatctagactgtggatttagaacctgtccatttgaatgtcat
aacagaggtcagtgtgtaaatggtatatgtatatgtgattctggatatagtgggctagat
tgcggctctgcttcatgcccaaataattgtcaaaatcgtggaaaatgtcacaatggagag
tgtgtttgtgattttggatatactggggttgaatgtgggaccgaagcctgtccagaaaac
tgtcacatacatggccgatgtgagcaaggggtctgtatctgccagcctggatatacaggc
ttggattgtagttctaaatcctgtccaaagaattgtagcggcaatgggcagtgtataaat
ggaaaatgtatctgtgactttggttatactggacccgtttgtggaagcagagcttgccct
gggaactgtggtggacgaggaaaatgcataaatggggtctgtgtgtgcaaaaagggatat
gaaggagcggactgtagcgtggttgtcacagaacttgtagcagttactgggttacgtgtg
acgtctgtggaagaatcttcagtaactattgagtgggaccttcaacagactcccccagat
gtatatgccatttcattcaaagcaaagaaggaaaatggcttattaaacaatacagtggat
ggcactctcacttcatttgttcagactggtctggcctcaggagaggagtatcttgtgtct
atacaaccccagaagggactaactgttgggcctgaaaccactgtaactgctactacaagc
attgaggctccactgggactcagagtaacagaaatcaccaccacttctttccttttaaga
tgggaacgtccccagtctttccctgatcggtacatagtgacactagtgtccccaactggg
aaggagagaaagctgaaagtccctggaaagggtgatagggtgagggttacagcacttgaa
gagggaacaatttacaaagtgatattgagagcagaaaggggacaggagcaaagcaaaggg
atggagacgactgctaaaacagctcttgacagggagagaaaaaatatagatgatgaagat
gcccgcaagaagaaaggaaaggtagtgacccctcaacagggaggtcaacttgaaaagcca
cgattttcagaagatcattaccgtcctgcaacaacggggcaagttttaattcattctgga
ggtggagaaggcagttcaaagacaagggagattacagagtatattgttgaagaccaaaca
caaaagggtgtggtgaacactactaggaagactatccagaccactattattactacatac
cacattcagaatcataaggaaggagatgttgtggatatgtttgaggatactaagagtagt
gaatattcacagacaaagcatctaccagatagaaaaaaaataagcagtgatgtagaggga
agtgatgtgggagagactacaggacagactgatataacagggactattatcagaaagcac
acacctgagaagaaagtgcaaagttggattgccagaggaaaaattatagatgcatcttct
gtggagaaacctccaaaccatcttacacagaaaactaataaaacatcagttcagttaggt
gatacacaggcagctggacaacagaggaaaaaaccaagtgataaatctgtggaggtggtg
actgggatccaagttaatctagggagtacagagtcaaaaacattttccgatgaaaaatta
cctttgaccataaatgagaaacagttggagaatttaaaggatgaaagagatccaggcagt
atacttgatgatgtatcaacaaaagtgcatacagaaggcagaaactctagaaaaaataat
acagggttggagaaaaaaaggctagatgcaggtgtaagagttcagaaacaaaataaaatg
gaaaagttatatcctggaggtttacacataaaagctgttattgagaacttaccaacaaaa
ctatcagtttacaatgggacctttatacaacgtcttgaaagttacctgcgttcaacttct
tacccactaagagctaatcaaacagtggaatctgtggccagagcaattttcctttactta
gtaaagtacaaacccaatagttttacaggaatggtatatgatcgtcttccacaaaaaact
ccagattcacctgaaaatgaggaaccttttggagcaagtaaaattcagggtaatatgggg
agtgttatggtggataataagccagatcaagcaaaagaagtagtagttctcagaccaaag
gataggcatgcaacaatggaaggatcacagagaaaagtagacactccagctataagtagg
tacacttcttcatctgaactttatgaagttaacatgaaagtcctgaaggagactccaacc
tcaagagaagaggaaaagttaataagtgagaagagcaccttacaacgccttcctctaaaa
actcagttaaataaaacatactcggaaaagatttctgattctacaaaaagaactatagta
cctgataatcaaagggtgtggcaagcaggtgaaaaggataagacattcactggcaaaaat
aagaatgaaagcttgaaaaagactacagtgtccccaacaactatggaatatttgatctac
actcctagtgtagatacattgaacagacccactcaaagctcagaagacaaaacagcacct
ggtgtaattttgttgactaatgacaaaggaattaccccgaaaaagcaaccttattatggt
aaaaaagttccaccaagaccagagaaagtaggatctaaaataaaggagggggagataaaa
aatgaacgtctcatagataaagattcaagaagtaagatacttgatgacaaggcatcttta
ctgcaagcgagagagggtgaggagaaagaaaatgaagagaagactatccaagcacttggg
tctgctggtccctcaacgcatcctacatcagtaaaaatttctggtccaggcatttttggc
agaccaactgttgtaaagagtactcctacaaatcttgttgtatccctagatggtcttggg
gttctattggacaaggtgatgattcattatcgtccatttcaagccatcatgactgatatg
ccacaacaactagaggttggaaaaggagttggaaaagttgtgatcagggatctagaacca
gggaccacctaccgccttgaaattcatgggctattgagggggcagtcctccaagtcctac
attttggtagctgacacagctcagagtcccacaattttgcccactgaggtgaccacaaag
ccaacaatatccccaatagaggacattttaactaccacggcttcttcagctactacacgg
ccccgcataccagttcaaatgggggcgctgcaagtgagaaatgtaacaagtgaaagtatc
acattagtctggaaggccaagattggggcttatgattcattcttggtgcgctacgatgag
gtaactgatggtgttagtccacaagaactatctgttccaggagaccaacgagaggtgact
ttaagagggctgactcaagataccagatatgaagtattgctctatggtataagggaagga
aagctgacacggccttttaaagaagaagtaacaacagaacctcaccctaagagaggcacg
ccccctcgcctttctcccctcttggtatctgaagtccatagaaactctgcgcttctatca
tgggaacctctagatggtgattttgatgcttacatattgcgatatggatcccctgagggc
cccatgcaagaggaaaccttgagaggagaccagacatctttccttatctctggactggtt
gcagcagttaattactcggttgagctgcgtggcatttggggagagagctacactgagcct
caggctacatatgtgctgacagaaaaaccacagcctccccgcttggagtccctcactctg
tttgacgtgcgcagtgaatccctaaatctctcttgggatgtccagggtggagattttgat
tcttttctcctttggtaccgtgatggggagggaaagccacaggaaatagctcttgataaa
gatttgcgctcttccactgtcagagacttgaagcctgggaaaaagtataaatttgtcttg
tatggcatatcaggggaaaagaggagcaaaccagtgacagcagaggggagcacagacaaa
ctacaacaaccacaactagagtctctctctgtgtctgatgtccacagtgactctgtgcta
ctttcttgggtggttcagggtggtaaatttgactcattccttctaaattatcgagacgct
gagggcaaacccaaggaagcttctttggaaggggaacagcgcagtgtcccagttggggat
ctgaagcctggaaagaaatataaatttgtcctgtatgggatttcaggaggaaagaaaagc
aaagcagcgatagcagagaccaccacaaaaccacgtgaaaaagtagtaccatcttcgcct
gcaacacccactattcctcgtctggttgacctgcaagccaatgaaatagggaaagattca
gtaaatttgtcatggagagtggagggtgaatcttcatttgactggattgtggtacagtat
ggagggcctgatggtgtagttagagagcagcaggttccaggaggagacacaagcacctta
gtcacaggcctgctgccatccaggcgatacaaattcagtctgtatggcattaaagggcag
aaacacagcaaacctttatccactgaaattgaaacaggcttcctggaggccgttggtcaa
ccttcctctttcctgaatgatctttttgtttctccacatgggcctcattccatcttagtt
tcttggcaagctccagaaggatcatttgactcatttgtcattcgttatggcattgagggt
catgagaaacctcagaaagaggcatctgtaaatggaactgcacgtactcttttacttgct
aacctccagcctgacaccccttataaagtaaaactacatggtgttagaagagggaaagag
cagggcagtttagaaaccactgggcgtacaggatctttagacctggaacctcctcaaaac
ttaagatttaatgatgtagaagaaacatcattaactgtcagctgggatccccccaatcct
gaaactaccacattcaaagtatcatatcagcttgcaaaggggggagaacctgaaagtgta
aatgtagttggagacagcaaatctcttcagagacttaatgttggaactcgttatgaagtt
actgtggtatctgtacgagggtttgaggaaagtcagcctctgacaggctacatcactaca
ggtggaggtgggccacattctctgcatgcccatgatgtgactgaagaatcagcactttta
cgctgggaaccagaaccgggatttgtggacagatatgtagtgacatacagggcagagaat
gtgctttcagttacgcatgaagttccaggtgatcagactgagcttcctatctctggtctg
aatcctcacactgaatactatgcaagtgtgcaaagcctccatggatccaagctgagctca
ccaacatctacctctttcattactagtgctgatactccacgggaactccttgccagtcag
atcactgctcagagtgctctgttgacctggaaaccacctcaggttgttcctgatgggtat
cgacttgtgtatcaaacacatgatggtgaaattaaggagttaattttactagccaacttg
tcctcctttaccctaagtcatctcacaccttccaccccatacaaagttcagcttcatgcc
ttgcgtggtgcttccagctcggcacccatttccacctccttcactacaggtcgaataaga
tatccatttccccgagattgctgggaaaagcatatgaatggagacttgcagagtggtgtg
ttcacaatatatctgggaggatcaaaagatgatccattgctggtgtactgtgacatggag
actgatggaggtggctggatagtttttcagaggaggatagatgggagaactgatttttgg
agaaactggaggcaatataaggaggggtttggtaaccttacttcagagttctggctggga
aacattgctctgcatcgtctatcatctttggcaccatatgagttacgtgtagacctccgg
gcaggagctgaggctgcctatgctgtgtatgaagattttcgtgttgagggtgaagacaaa
cactttaggctgcggataggagcatacagaggaaatgcaggggactctctgagctatcac
aacaatatgattttttcaacacgggaccgtgatgcagagaaaagaatattaccttgttcc
atttcttatcgtggagcttggtggtataagaactgccactatgccaatcttaatgggatg
tatggcaacaacaaagaccatcaaggtgtgaactggcacacatggaaaggcttcgaattt
tcgattccattcactgagatgaagatgcggccacagagaacaggcaactggcgccgtctt
tag
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integrated database retrieval system
