Xenopus tropicalis (tropical clawed frog): 100493962
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Entry
100493962 CDS
T01011
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100493962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100493962
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100493962
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100493962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
zf-RING_10
U-box
BshC
DUF2959
Med11
DUF2121
AAA_13
Exonuc_VII_L
FUT8_N_cat
Baculo_PEP_C
Leu_zip
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
100493962
NCBI-ProteinID:
XP_017945523
UniProt:
A0A803JFP6
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All DBs
Position
1:complement(214396459..214398591)
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AA seq
558 aa
AA seq
DB search
MAAADLRDELSCSICLSIYTDPVSLPCGHNFCRGCIGRTWDWQEGIEEDPSCPECRQRFK
RKPELATAWKLRGMVERFCQTETEPGETGIFCTYCLLSPVPAAKSCLLCEASLCDTHLRG
HCQSAEHVLTEPTASFMGRKCSVHHKVLEYHCCEDSACICVYCWVDEKHRGHRVELLSEA
SEKKKEKLRKVLEKLSPEREETERGAQRLQERRREVAEVAAGETEKVTALFRGIREELEA
LEKRLLSDISRQKEELSRQLTELIQQLEIKKDELSRKIRHIEELCNMADPLTVLQEQWES
HGAAFCGAEGADTEGREREDTEGADTEGREREGTEGADTEGREREGIKVPAVGDLDVGRI
SETLLTGLAGIVTGVEGRVIPGQEATELVLDINTAGNRVSVSGDGKSASYSHTDQRRPQT
PERFLYWPQALSTRSFPSGRHYWEVEVSESGYWGVGAAYPSIERGGNQSGFGNNNKSWCL
YRWNNNYTVRHDRKDTQLPHIPPCRRIRISLDYEAGRLSFYELSEPIRYLHTFTASFTEP
LHAAFWVGWYGDWVRIIS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgatctgagagacgagctgagctgctccatctgcctgagcatttatact
gatccggtatccctgccctgtggccataacttctgccggggctgcattgggagaacatgg
gactggcaggaggggatagaggaagatccttcttgccctgaatgcagacagagatttaaa
agaaaacctgaactggcaacagcctggaagctgcgtggcatggtggagaggttctgtcag
actgagacagagccgggggagactgggatcttctgcacttactgtctcctctctcctgta
cctgctgctaaatcctgtctcctgtgtgaggcttctctgtgtgatacccacctgaggggg
cactgccagtcagcagaacatgtactcactgagcccaccgcttcctttatggggagaaaa
tgttctgtacatcacaaggttctggagtatcactgttgtgaggactctgcctgtatctgt
gtgtattgctgggtggatgagaagcaccggggccacagggtggagctgctgagtgaggcc
tctgagaagaagaaagagaaactgaggaaagttctggagaaactgagcccagagagagag
gagactgagagaggagcccagaggctgcaggagcgcaggagagaagtggcagaagtggca
gccggtgagacagagaaagtcactgccctgtttaggggcatcagggaagagctggaagcc
ctagagaagcgtctcctgagtgacatctccaggcagaaagaggagctttcccgccaactc
actgagttgatccaacagctggaaataaagaaggacgagctgtccaggaagatccgtcac
attgaggagctgtgcaacatggcagatccactcactgtcctacaggaacaatgggaatcc
catggagctgccttttgtggggctgagggggcagatactgagggcagagagagagaggat
actgagggggcagatactgagggcagagagagagagggtactgagggggcagatactgag
ggcagagagagagagggtataaaggtcccggctgtaggggatctggatgtgggtcggatc
tcagagacattactcacaggcttagctgggattgtgactggggtagagggaagggtgatc
cctgggcaggaggctacagagctggtactggatataaacacggctgggaatcgtgtatct
gtatcaggggatgggaaatctgcttcctactcacatacagaccagcgtcgcccacaaacc
ccagagagatttctgtattggcctcaggctttaagcaccaggagtttcccctcagggcga
cattactgggaagtggaggtcagtgaatcagggtactggggggtaggggcggcctatccc
agtatagagaggggagggaatcagtccggctttggaaataataataagtcctggtgtttg
tacagatggaataataactatacagtgagacatgacaggaaagacacacagttaccccac
atccctccctgcaggagaatcaggatctcattggactatgaggctggacgcctgtccttt
tatgagctgagtgagccaatcaggtacttacacaccttcactgcctccttcactgagccc
cttcatgctgcattctgggtagggtggtatggtgactgggtgagaatcattagttag
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integrated database retrieval system
