Xanthomonas vesicatoria: BJD12_12285
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Entry
BJD12_12285 CDS
T04741
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJD12_12285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xve03400
]
BJD12_12285
Enzymes [BR:
xve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BJD12_12285
DNA repair and recombination proteins [BR:
xve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJD12_12285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
RecD_N
Helicase_RecD
UvrD_C
AAA_22
AAA_16
DEAD
nSTAND3
T2SSE
SLFN-g3_helicase
AAA_28
Rad17
ATPase
Motif
Other DBs
NCBI-ProteinID:
APP75879
LinkDB
All DBs
Position
complement(2836174..2838510)
Genome browser
AA seq
778 aa
AA seq
DB search
MNQPNLFSALIKADALRPLDLAFAQSLQRLAPDTDPQVLAAAALASLAVTSGHAGLDPAR
AAMLLDAREGQSPALPDPGDWQRSLAASRWVDQPAPEDPAAADCPLVLEHGLLYLRRYRE
YERRLALGLQRIAAQAPPPFDAATLAPLFAQLFPQASPLPPGEGARRAGEGTGLPEPSAD
QEGTAPLEPSHHQDGTNPSHHPDRQAQAAALALRRTLLLVTGGPGTGKTTTIARLLLLRI
AQAQVSNTPAPRIALAAPTGRAAERMAESLRFAVARAIADGIQLAPTPAAASPGQAKPSP
YPVTSPPHQATEPPHPDVSPLPQAGEGARRVGEGQPSTWNSLLPTGASTLHRLLGVIPDS
PNFRHNADNPLPFDLIVVDEASMVDLPLMCKLVEAVADGTQLILLGDADQLPSVEAGDVL
AAILQAAGPGDTLQPQDAQALQPLLGNAPGDTTPAATHSGGLAGHRVHLLRGYRQAHDFA
LAPLADAVRAGDADTALALLRSGELAGVHFHEDGEDPLTLGRDALLAHWRALADAHDPAA
ALRDAARLRLLTAVRAGPQGARGLNARIEQLLAETGSGARRLGSASPWFQGRLLLITENS
YRHGLFNGDVGICLRSDASPFSGRSDEGPSSPPGQSAATANRHAPGTDSRAQGPLVAWFE
GDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDTVWLQLPTRDARVLSRELLYTGITR
ARRALHLAGSEAVIRAALARHAARISGLAWRLGAQQQAAPAKPATEPSTALPVQGSLF
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccaaacctcttcagcgcgttaatcaaggccgatgcgctacgcccgctggat
ctggccttcgcgcaaagcctgcaacgcctggccccggacaccgacccccaggtcctggcc
gccgccgcgctcgcctcgctggccgtcaccagcggtcatgcagggctggaccccgcccgc
gccgccatgctgctggacgcgcgcgagggccaatcgcccgcgctccccgatccaggcgac
tggcaacgcagcctggccgcctcgcgctgggtcgatcaaccggctccggaagaccccgcc
gccgccgactgcccgctggtcctggaacacggcctgctctacctgcgccgctaccgcgag
tacgaacgccgcctggcgctgggcctgcaacgcatcgccgcccaagcgccgccgcccttc
gacgccgccacgctagccccgctgttcgcgcagctattcccccaggcttcccctctgccc
ccgggagagggtgcccgaagggcgggtgagggtacgggcctgcccgagccatccgccgac
caggaaggtacggccccgctcgagccatcccaccaccaagacggcacgaacccatcccat
cacccggaccgtcaggcccaggccgccgccctggccctgcgccgcaccctgctgctggtc
accggcggccccggcaccggcaagaccaccaccatcgcccgcctgctgctgctgcgcatc
gcccaggcgcaagtatccaacaccccggcaccgcgcatcgccctggccgcgcccaccggc
cgcgccgccgagcgcatggccgagagcctgcgctttgcggtcgcccgcgccatcgccgac
ggcatccagctcgcacccactcccgctgcagcctcgcccgggcaagcgaagccgtcgccg
taccccgtcacttcccctccccatcaagcgacagagccaccgcaccccgatgtttcccct
ctcccgcaagcgggagagggtgcccgaagggtgggtgagggccagccgtccacctggaac
tccctcctccccaccggcgccagcaccctccaccgcctgctcggtgtcattcccgattcc
ccgaacttccgccataacgcggacaatccgctgccgttcgacctgatcgtggtcgacgaa
gcctccatggtcgacctgccgctgatgtgcaagctggtggaagccgtggccgacggcacc
cagctgatcctgctcggcgatgccgaccagctgccctcggtagaagccggcgacgtgctc
gccgccatcctgcaggccgccggccccggcgacaccctgcagccgcaggatgcacaggcg
ctgcaaccgctgctcggcaacgcgcccggcgacaccacgcccgccgccacccacagcggc
ggcctggccggccaccgcgtgcacctgctgcgcggctaccgtcaggcgcacgacttcgcg
ctcgccccgttggccgacgccgtgcgcgccggcgacgccgacaccgccctggccctgctg
cgcagtggcgagctggccggcgtgcacttccacgaagacggcgaagacccgctcaccctg
ggccgcgacgcactgctcgcccactggcgcgcgctggccgacgcgcacgacccggccgcc
gccctgcgcgatgccgcgcgcctgcgcctgctcaccgccgtgcgcgccggcccgcagggc
gcacgtggcctcaacgcccgtatcgaacaactgctggccgaaaccggctccggcgcccgc
cgtctcggcagcgcctcgccctggtttcagggccgcctgctgctgatcaccgaaaacagc
taccgccacggcctgttcaatggcgatgtcggcatctgcctgcgaagcgatgcgagtccc
ttttcggggcgcagcgacgaaggcccgtcctcaccgccaggccagtccgccgccaccgcc
aaccgccacgccccaggcaccgacagccgtgcccaaggcccattggtcgcctggttcgaa
ggcgacggcgacggacaggtgcgcggcttccaccccgccgcactgcccgcgcacgaaagc
gccttcgccatgaccgtgcacaaggcccagggcagcgaattcgacaccgtctggctgcaa
ctgcccacccgcgacgcccgcgtgctcagccgcgaactgctctacaccggcatcacccgc
gcccgccgcgccctgcacctggccggcagcgaagcagtcatccgcgccgcgctcgcaagg
cacgccgcgcggatttcggggctggcatggcggttgggtgcgcagcagcaggcggcaccc
gccaagccagcaacagaaccatccactgcgttgcctgtacaggggtcgttgttctga
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