Yersinia enterocolitica (type O 5) YE53/03: YE5303_34441
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Entry
YE5303_34441 CDS
T03739
Symbol
dacA
Name
(GenBank) putative penicillin-binding protein 5
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee00550
Peptidoglycan biosynthesis
yee01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YE5303_34441 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yee01002
]
YE5303_34441 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yee01011
]
YE5303_34441 (dacA)
Enzymes [BR:
yee01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YE5303_34441 (dacA)
Peptidases and inhibitors [BR:
yee01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
YE5303_34441 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
yee01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
YE5303_34441 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CCQ41492
LinkDB
All DBs
Position
3443698..3444909
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AA seq
403 aa
AA seq
DB search
MKYVTTSRIIKSLALGTVIVMSAASAANADDVNLKTMIPGVPQIDAEAYVLIDYNSGKVL
AEMNADARRNPASLTKMMTSYVIGQAIKAGKIGPEDMVTVGKDAWATGNPEFKGSSLMFL
KPGDRVPVSKLTRGINLQSGNDACVAMADYVAGSQDSFVNLMNNYVKALGLQNTQFKTVH
GLDAEGQYSSARDMALIGQALIRDVPDEYAIYKEKEFTFNNIRQMNRNGLLWDTSLNVDG
IKTGHTDAAGYNLVASATDGQMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKV
GKEFASEPVWFGDSDRVQLGVDKDVYLTIPRGRMKDLKASYVLNTPEIHAPLAKNQVVGM
INFQLDGKTIDQRPLVVMNEVKEGGIFSRMVDYIKLMFHRWFG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgtaactacttctcgtattatcaagagcctggcgctcggcactgttattgtt
atgagcgcagcatctgctgcaaacgctgatgacgtcaacttaaaaaccatgatccccggc
gtaccacagatcgacgcggaagcctacgttctgattgattacaactccggcaaagtatta
gcagaaatgaatgccgatgcgcgccgcaatcctgccagcctgaccaaaatgatgaccagc
tatgtcattgggcaagccatcaaagcaggtaaaatcgggccagaagatatggttaccgtg
ggcaaagatgcgtgggcgaccggcaatcctgagttcaagggctcttcgttgatgttcctg
aagccaggtgaccgtgtgccagtgtctaaactgacccgcggtatcaacctgcaatcgggt
aacgatgcttgcgttgctatggcggattacgttgcgggtagccaggactcattcgtaaac
ctgatgaacaattacgttaaagcgctgggcctgcaaaatacccagttcaaaaccgttcac
ggtttagatgctgaagggcagtacagctctgcgcgcgatatggcgttgattggtcaagcg
ctgattcgcgatgtaccagatgagtatgccatctacaaagagaaagaattcactttcaac
aatattcgccagatgaaccgtaatggtttgctgtgggataccagcttaaatgttgatggt
attaaaaccggccataccgatgctgctggctataatctggtggcatctgctaccgatggt
caaatgcgtttgatttcagccgttctgggtggtcatacttataaaggccgtgaaactgaa
agcaaaaaactgctgacttggggcttccgtttctttgaaaccgtagcaccattgaaagtc
ggtaaagagtttgcttcagagccagtttggttcggtgacagtgaccgggtgcagttgggt
gtggataaagacgtctacctgactattccacgtggccgaatgaaagacttgaaagccagc
tatgttctgaatactccagaaatccatgcaccactggcgaaaaaccaggttgtcgggatg
attaacttccagttggatggtaaaaccatcgatcaacggccactggttgtcatgaatgaa
gtgaaagaaggcgggatcttcagccgcatggtggactacatcaaactgatgttccaccgc
tggtttggctaa
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