Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE4170
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Entry
YE4170 CDS
T00469
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yen03032
]
YE4170 (gyrB)
03400 DNA repair and recombination proteins [BR:
yen03400
]
YE4170 (gyrB)
Enzymes [BR:
yen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YE4170 (gyrB)
DNA replication proteins [BR:
yen03032
]
Prokaryotic type
DNA Topoisomerases
YE4170 (gyrB)
DNA repair and recombination proteins [BR:
yen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YE4170 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
DUF6865
Motif
Other DBs
NCBI-ProteinID:
CAL14186
UniProt:
A1JT76
LinkDB
All DBs
Position
complement(4568018..4570432)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII
VTIHSDNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHEQTYKMGVPQAPLKVVGETDQTGTTVRFWPSFQTFTNNT
EFQYEILAKRLRELSFLNSGVSIKLKDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE
GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG
KQEQYIKDDDAMEQYQMTLALDGAALHINADAPPLVGEHLEKLVAEHYSVQKTIARMERR
YPRALLNNLIYQPTLQEEDLSDKEAVTQWIDSLVVMLNEKEQHGSSYSSVVRENRERQLF
EPVLRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGLIEEGAFVERGERRVPVSSFE
DALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPTSRRMLRVMVKDAIAADQLFTTL
MGDAVEPRRAFIEENALRAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacttatgactcctcaagtatcaaggtattaaaagggctggatgcggttcgt
aagcgtccgggcatgtatatcggtgatactgatgacggtaccggtctgcaccacatggta
ttcgaggttgtggacaacgctatcgacgaagccctcgctggccactgtaaagaaattatc
gtcaccatccactcggataactctgtttctgtacaggatgatggccgtggtatcccaacc
ggtatgcatgacgaggaaggggtatcggcagctgaggtcatcatgaccgtgttgcatgct
ggcggtaagtttgacgataactcgtacaaagtttccggtggtttgcacggcgtaggtgta
tccgttgttaacgccctgtctgaaaaactggagctggtgattcgccgtgaaggtaaagtt
cacgagcagacttacaagatgggtgtgccgcaggcaccattgaaagtggtgggcgaaacc
gatcaaaccgggacaaccgtgcgtttctggccgagcttccagacgttcaccaataatacc
gaattccaatatgaaatcctggcaaaacgtctgcgtgagctgtcgttcctgaactctggg
gtttcaatcaagctgaaagacaaacgtaacgacaaagaagaccacttccattacgaaggc
ggtatcaaagcgtttgttgagtatctgaacaaaaacaaaaacccgatccacccgaaagtg
ttctatttctccaccatgaaagatgatatcggtgtggaagtggcattgcagtggaacgat
ggtttccaggaaaatatttactgtttcaccaacaacattccacagcgcgatggggggact
cacttagtcgggttccgtacggcgatgactcgtaccctgaatagctacatggataaagaa
ggttacagtaaaaaagcgaaaatcagtgcaaccggtgatgatgcccgtgaaggtttgatt
gctgtggtttccgtgaaagtgccagaccctaaattctcctcacagaccaaagataaactg
gtttcttctgaggtaaaaactgcggtcgaaacgctgatgaacgagaagctggttgagtat
ttgctggaaaacccaaccgacgccaaaatcgtggttggcaaaattattgacgcggcccgt
gctcgtgaagctgcgcgtaaagctcgtgaaatgacacgccgtaaaggtgcactggatttg
gctggcttaccaggcaaactggctgactgtcaggaacgtgacccagcattgtccgaactc
tacttagtggaaggggactcagcgggcggctctgcgaaacaaggccgtaaccgtaaaaat
caggctattttgccgctgaaaggtaaaattctgaacgtcgagaaagcgcgttttgacaaa
atgctttcttcgcaggaagtggcaacactgatcaccgcgttgggttgtggtattggacgg
gatgaatataacccggacaaattgcgttatcacaatatcattatcatgaccgatgccgac
gtagatggttctcacatccgtacgttattgttgaccttcttctaccgccagatgccggaa
attattgagcgtggtcatgtatttatcgctcagccgccactgtataaagtgaaaaaaggt
aaacaagagcaatacatcaaagatgatgacgcgatggagcagtatcagatgactctggca
ctggatggcgcggctctgcatatcaatgccgatgcaccaccactggtaggcgaacatctg
gagaaactggttgccgagcactacagcgtccagaagactatcgctcgtatggaacgtcgt
tatccgcgtgctttactgaataacctgatttatcaaccaaccttgcaagaagaggatttg
agcgataaagaggcggtaacgcaatggattgattcgctggtggtcatgctaaatgagaaa
gaacagcatggcagcagctacagttcagtggtgcgcgaaaaccgtgagcgtcagctgttt
gagccggtattgcgtattcgtacccacggggttgataccgattatgatctggacttcgat
ttcatccacggtggtgaatatcgcaagatctgtctgttgggcgacaagttacgcggctta
atcgaagaaggtgcttttgttgaacgtggcgagcgccgtgtgccggtttcaagcttcgaa
gatgcacttgactggttggttaaagagtcgcgtcgtggtctggcaatccagcgctataaa
ggtctgggtgaaatgaatccagagcaactgtgggaaaccactatggacccaaccagccgc
cgtatgctgcgggtgatggtgaaagatgccattgcggcagaccagttgttcaccactctg
atgggggacgcggttgaacctcgccgcgcctttatcgaagagaatgcgttgcgagcagca
aatatcgatatctaa
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