Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C1897
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Entry
YE105_C1897 CDS
T01480
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
yep
Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YE105_C1897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yep03400
]
YE105_C1897
Enzymes [BR:
yep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YE105_C1897
DNA repair and recombination proteins [BR:
yep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YE105_C1897
RecFOR pathway proteins
YE105_C1897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
nSTAND3
AAA_3
AAA_16
Mg_chelatase
AAA_14
AAA_18
AAA_2
Sigma54_activat
Rad17
AAA_28
RNA_helicase
AAA_17
NTPase_1
NB-ARC
AAA_24
TsaE
Bac_DnaA
Sigma54_activ_2
AAA_19
ABC_tran
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ADZ42393
LinkDB
All DBs
Position
2198484..2199488
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISAGVISDEESIDRAIRPKLLAEYVGQPHVREQMEIFIQAAKQRGDALDHVLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLEHIVSRSAKCLGLELTPEGAHQLARRSRGTPRITNRLLRRVRDFAEVRADG
AINGDVAMKALDMLNVDAEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFIQRTPRGRIATNHAYKHFGITREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagaccgcctgatctctgcgggtgttatcagtgatgaagagagcattgac
agggctatccgtccgaaactattggctgaatatgtcgggcaacctcatgttcgcgagcaa
atggaaatcttcatccaggcggcgaaacagcgcggtgatgcgttagatcatgtgctgata
tttggccctccgggtttaggtaaaaccacattggccaatattgttgctaatgaaatgggt
gtcaatttgcgcaccacctccggcccggtgttggaaaaagcgggcgatttagccgctatg
ttaaccaacctggagccgcatgatgtgctgtttattgatgaaattcaccgattatctcca
gtggtagaggaaattttgtatccagcgatggaagattatcaactggatatcatgattggt
gaaggcccagctgcacgttccatcaaactcgatctaccgccgtttaccttaattggtgcg
actacacgagccggttcactgacctctccactgcgcgatcgctttggtattgtgcagcgg
cttgagttctatcaagtcgctgatttagaacatatcgtttcgcgtagtgccaagtgtctg
ggcctggaattgactccggaaggcgcgcaccagttggcacgccgctccagaggaacgcca
cgtatcaccaaccgtttgttgcgccgggtgcgtgacttcgctgaggtgagggccgatggg
gctatcaacggcgatgtggcgatgaaagcgctggatatgctgaatgttgatgctgaagga
ttcgattttatggatcgaaaacttttgctagcggtcatcgataagtttatgggggggccg
gtggggctggataacctcgccgcggcaattggtgaagagcgggaaaccattgaagatgtt
ctggagccgtatttaatccagcaaggttttattcagcgcactccgcgcgggcggattgct
accaatcacgcttataaacattttggtatcacccgcgaagagtaa
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