Yersinia rochesterensis: CH54_2051
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Entry
CH54_2051 CDS
T03609
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22051
miniconductance mechanosensitive channel
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_2051
Transporters [BR:
ykr02000
]
Other transporters
Pores ion channels [TC:
1
]
CH54_2051
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AJJ35051
LinkDB
All DBs
Position
2246050..2249394
Genome browser
AA seq
1114 aa
AA seq
DB search
MRLIISWFSAILLSLVMLLSLPLHAATQPNEDQLRQELKQAEANKGMVNQAEIVQALQGA
LSWLADAKESDIRAQQYQKAIDDFPKLTRELRQQLAQEGDKPLPVPNNLSTSELEQQVLQ
VSSQLLELSRLSQQEQDRAREISESLNQLPQQQSEARRILAEISTRLQAQSSPTTPVAQA
QLALLQAEAVARKAKANELELSQLSANNRQELSRLRAELYKKRQERVDAQLQSLRNNLNS
QRQQAAEQALERTELLAEQGGDLPESITQQLQINRDLSQALNQQVQRIDLISSQQRQAVT
QTQQVRQALSTIREQAQWLGVSTALGEALRAQVARLPDVPKNQQLDRDMAQLRVQRLQYE
DMLEKLQQQNVKLTQDDGTPLTTEQQRILDAQWRTQRELLNSLLSGYDTQILELTKLKVA
NSQLVDALSEVREATHRYLFWVADVSPISLSYPLNVAHDLTRLLSLDTLSQLSQAFVMMM
TSQETLLPIIGALLFVGFSISSRRHYHAFLERASSRVGKVTQDHFSLTLRTVFWSILMAL
PLPVLWAAVGYGLQNAWSYPMAIAIGNAVTATVPVLWVFMISASFAHPHGLFITHFRWSP
TQVGRAMRFYRMSVWLIIPLMMALITFENYNDREFAGTLGRLCFILLCIALSLVTNSLKR
AGIPLYLDKKGSGDNIVNTALWGLLLSAPLMAALASALGYLTTSQALLARLETSVAIWFF
LLVVYHIIRRWMLIQRRRIAFDRAKQRRADILAQRARGEDDTIPHNNSTEGSIDVEEPVI
DLDVISAQSLRLVRSILTMIALVSVIVLWSEIHSAFGFLENIRLWDSSSTINGIESVQAI
TMGSLLIAILVMIVTTQLVRNFPALLELALLQHLDLTPGTGYAISTITKYLLILIGGLVG
FSMLGIEWAKFQWLVAALGLGLGFGLQEIFANFVSGLIILFEKPIRIGDTVTIRDLTGSV
TKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSITRVVLTVPAPAETSSEEVTEV
LLTAARRCTLVLDNPPPEVYLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGYRE
HGITLPFPPFQARLETLGRGRVVSSNRSRTPGSL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctaataatttcatggttttcagccattttactgtcattagtcatgttgttgtcc
ctgccgcttcatgcggcaactcagccgaatgaagatcagctcagacaagagctgaaacag
gctgaagccaataaagggatggtaaatcaggcagaaattgttcaggcgctgcaaggggct
cttagttggttagcagatgccaaagaatctgatatccgcgcccagcagtatcaaaaagcc
attgatgactttcctaagctcacccgtgagttacgccaacaattggcgcaggaaggggat
aaacccctgccagtccctaataatctgtccacgtccgaactggaacagcaagtgctgcaa
gtcagcagccaattattagagttaagccgcctgtcacagcaggagcaagaccgcgcacgg
gaaatcagtgagtcactgaatcagctgccgcaacaacaatcagaagcccggcgcattctg
gcagaaatcagcacgcgacttcaggcgcaaagtagccccaccaccccagtagcacaagcg
cagttggcattattgcaagctgaagccgtggcccgcaaagcgaaagccaatgagctggag
ctttcccaactctccgccaataatcgccaagagctttcccggctacgggccgagctatac
aaaaagcgccaggagcgggtcgatgctcaactccagagcttgcgtaacaacctgaatagt
cagcgccaacaagccgcagaacaagcgctcgagcgcacagaattactggccgaacaaggc
ggtgatttacctgaatctattacccaacagttgcaaataaaccgcgatttgtctcaagcg
ctaaatcagcaagtgcagcgcattgacctgatttcctcgcagcaacgccaggccgtcaca
caaactcagcaggttcgtcaggcacttagcactatccgtgagcaagctcaatggttgggg
gtttcaaccgcattgggtgaagcattgcgagcacaagtggcgaggttgcccgatgtgccc
aaaaatcagcaattggatcgcgatatggcccaattgcgagttcaacgtctgcaatatgaa
gacatgctggagaagttacagcagcaaaatgtcaaattaacacaagacgatggcacgcca
ctgaccactgagcaacagcgaattctcgatgctcagtggcgcacgcagcgcgaattactg
aattctctgttatccggttatgacactcagattcttgagctgaccaagctgaaagtggcc
aacagtcagttagtggatgccttaagtgaagttcgcgaagcgacccaccgctacctgttt
tgggtggcggatgttagcccgatatcactctcttatccgcttaacgtcgcccatgacctc
acccgtttgctgtcactcgacaccctttcgcagctcagccaagcctttgttatgatgatg
actagccaagaaacattgctgccaattattggcgcgctactgtttgtcggtttcagtatc
agctctcgccgccattatcatgctttcctggagcgcgccagcagccgtgttggcaaggtt
acacaagaccatttctccctgacgttgcgcaccgtattctggtccattctgatggcgttg
ccgttgcctgtcttatgggcggcggtcggatatggtttgcaaaatgcctggtcatatccg
atggctatcgccattggtaatgctgtcaccgcgaccgtgccggtgctgtgggtatttatg
ataagcgcctcatttgcccatccacatggcctgtttattacccacttccgctggtcacca
acccaagtgggccgggcaatgcgcttctatcgcatgtcagtgtggttgattatcccactg
atgatggcgctgattacattcgagaattataacgaccgcgaattcgctggcacactgggc
cggctgtgctttattttgctgtgtattgccttaagtttggtcaccaacagcttgaagcgg
gcgggtattccactctatctggataaaaaaggttctggcgataatattgttaacaccgcg
ctgtgggggcttttactgtctgcgccattgatggcagcattggcatctgctctgggttat
ctcaccacgtcacaagcattgttagcccgtctggaaacctcggtcgctatctggttcttc
ttgttggtggtttatcatattatccgccgctggatgctgattcagcgccgtcgcattgcc
tttgatcgcgccaaacagcgccgtgctgatattctggcgcaacgtgcccgtggcgaagac
gatacaataccgcacaataacagcacggaaggctccattgatgttgaagaaccggtgatt
gatctggatgtgatcagcgcgcagtctctgcgactggtgcgatccattctgaccatgatc
gcgttagtttctgtgatagtgctgtggtctgagattcattcagcttttggtttcctggaa
aatattcgcttgtgggactcgtcatcgacgataaacggtattgagtcagtacaggcgatc
accatgggatcactgctgatcgctattctggtgatgatcgtgacaacccaactggtgcgt
aatttcccagccctgctggagctggcactgttacaacatttggatctgacccccggaacc
ggctatgccatctccacgattaccaaatatctgttgatcctgattgggggtttggttggt
ttttctatgctgggaatcgaatgggcgaaattccaatggctggttgctgctctgggtttg
gggctaggctttggtttgcaggagattttcgccaacttcgtctccggcttgatcatcttg
tttgaaaaaccgatccgcatcggcgataccgtgactatccgtgacctcaccggtagcgtc
accaaaattaatactcgcgccacgaccatctcagattgggatcgtaaagaaattatcgtg
ccgaataaggcctttattactgagcaatttattaactggtcgctgtcggattccattacc
cgtgtggtcttgacggtaccggccccagcagaaaccagtagcgaagaagtgacggaagta
ttactgaccgcggcgcgccgctgtaccttggtcttggataacccgccacccgaggtctat
ttggtcgatctccagcaagggatccaaattttcgagctgcgtatttacgccgccgaaatg
ggccaccgtatgccgctgcgtcatgagattcatcagttgattctggccggttaccgcgag
cacggtattactctgccattcccacctttccaggcccgtctggaaactttgggccgtggg
cgcgtggtttcgtcgaatcgcagccgcacaccgggcagcttgtaa
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