Yersinia rochesterensis: CH54_3868
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Entry
CH54_3868 CDS
T03609
Symbol
mnmC
Name
(GenBank) tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ykr03016
]
CH54_3868 (mnmC)
Enzymes [BR:
ykr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
CH54_3868 (mnmC)
Transfer RNA biogenesis [BR:
ykr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CH54_3868 (mnmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
FAD_binding_2
NAD_binding_9
Mqo
NAD_binding_7
NAD_binding_8
Pyr_redox_3
ASXH
Motif
Other DBs
NCBI-ProteinID:
AJJ36491
LinkDB
All DBs
Position
complement(4178257..4180320)
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AA seq
687 aa
AA seq
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MSHSPIQTATLSWNEQGTPVSEQFGDIYFSNEDGLEETHHVFLKGNGFPERFVQHPRNNC
IFAETGFGTGLNFLTLWRDFAQFRQLHPSAKLQRLHYISVEKYPLQIADLAAAHDHWPEL
SSFAEQLRAQWPLPLAGCHRILLADGTITLDLWFGDVNTLLPQLDSSLNNQVDAWFLDGF
APAKNPDMWNDTLFSAMARMARPGGTFATFTAAGFVRRGLQQAGFDVAKVKGFGQKREML
TGTLPHNLLTDQYAPWYHRPSATHCDDIAIIGGGIVSALTALALLRRGAKVTLYCADTQS
AQGASGNRQGALYPLLNGKSDALETFFTRAFTFARRQYDQLLEQGIHFDHQWCGVSQLAF
DEKSRGKIDKMLQTDWPVLLAEAMSREQLSALAGLDCAHDGIHYPAGGWLCPSDLTTALM
TLAQQKGMTCHYGHELHQLDRVDGLWQLTFKQSLANKQPQASRQHATVVLATGHRLPEWE
QTRHLPLSAVRGQVSHIPTTPILSQLRQVLCYDGYLTPVNPANEHHCIGASYQRGDVATD
FRADEQQENRDRLLRCLPNVSWPQQVDVSDNQARCGVRCAIRDHLPMVGAVPDYAATLAQ
YQDLQRKVQRGEEIPLAPVWPELFMVGALGSRGLCSAPLVAEILAAQMFGEPQPLDATTL
AALNPNRFWIRKLLKGRPVQPRDPILS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgagccactccccaatccaaacggcaacattaagctggaatgaacagggtacacctgta
tcggaacagtttggtgacatctatttttccaatgaagatggactggaggaaactcaccac
gtttttcttaagggaaatggcttccccgagcgctttgtacagcacccgcgaaataactgt
atttttgctgagacaggttttggtaccgggttaaatttcctaacattatggcgcgatttc
gcccaatttcgccagcttcacccctcggctaaactccagcgtttgcactacattagcgtc
gagaaatacccgcttcagatcgccgatttagccgcagcccatgaccattggccggagcta
agctcttttgccgagcaactgcgcgcccaatggccattgccccttgccgggtgtcaccgc
attttgctggcagacggaactatcacgctggatctatggtttggtgatgtgaatactttg
ctgccacagttggattccagcttgaataatcaggtagatgcatggttccttgatgggttt
gcgccggctaaaaaccctgatatgtggaatgatacgctgtttagtgccatggctcgcatg
gcaaggccggggggcacatttgccacatttactgctgccggatttgtgcgccgcgggttg
caacaagcaggattcgacgtcgcgaaagtcaaaggttttggccagaaacgcgaaatgctg
accggcacgttgccacacaacctgcttactgaccaatacgcaccttggtatcatcggccc
tctgctacccattgtgatgatatcgcgattatcggcggaggaattgtcagcgcattaacc
gcattggccttgctgcgccgtggtgccaaagtcacactttactgtgctgatacgcaatcc
gcccaaggtgcctcaggtaaccggcaaggtgcactctacccactgctgaatggcaaaagt
gatgcgctggaaaccttcttcacccgcgcttttacctttgcccgtcgtcaatatgaccaa
ttgcttgagcaaggtattcactttgaccatcaatggtgtggtgtcagccaattggccttt
gacgaaaaaagtcgtggcaagattgataaaatgctgcaaaccgactggccggtattactt
gccgaagcgatgagccgtgaacaactgagtgcgttggccgggttagattgcgctcacgac
ggtatccactaccccgccggtggttggctttgcccatcagacctcactacagcgctcatg
acgctagcgcaacaaaagggtatgacctgccactatgggcatgaactgcatcaactagac
cgggttgacgggttatggcaactcacattcaagcaatcgctagcaaacaaacaaccgcag
gcaagcagacaacatgccactgtggtgctggccacaggtcaccgcttacctgaatgggaa
caaactcggcacctgccgctgtcggctgtgcgcgggcaagtttcgcacattcctaccacg
ccgatactcagccaattgcggcaagtgctgtgctacgacgggtatctgacgccggtaaac
ccggcgaatgagcatcactgtattggtgccagttaccagcgcggtgatgtggcgactgat
tttcgtgccgacgaacagcaagaaaaccgggatcgcctgttacgttgcctgccaaatgtc
agttggccgcagcaagtggatgtcagtgataatcaggcgcgctgcggtgtgcgctgtgct
attcgtgatcatttaccgatggtgggcgcagtgcctgattacgccgcaacactggcgcaa
tatcaggatttacagcgaaaagtccaacgtggtgaggaaattcctctcgcgccggtgtgg
ccggagttatttatggtgggagctttgggatcacgcggtttgtgcagtgcgccattggtg
gcagaaatcctagccgcacaaatgtttggcgaaccacagccattagatgcaaccacgcta
gcggcactgaatcctaaccgattttggattcgaaaattactgaaaggccggccggtgcaa
cctcgcgatccgatattatcttag
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