Yarrowia lipolytica: YALI0C16643g
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Entry
YALI0C16643g CDS
T01033
Name
(RefSeq) YALI0C16643p
KO
K10841
DNA excision repair protein ERCC-6
Organism
yli
Yarrowia lipolytica
Pathway
yli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YALI0C16643g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yli03036
]
YALI0C16643g
03400 DNA repair and recombination proteins [BR:
yli03400
]
YALI0C16643g
Chromosome and associated proteins [BR:
yli03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
YALI0C16643g
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
YALI0C16643g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
2909291
NCBI-ProteinID:
XP_501912
UniProt:
Q6CBQ0
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All DBs
Position
C:2345132..2348389
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AA seq
1085 aa
AA seq
DB search
MDELSRLSVDVVDQGTLENQITNEADSILKKREFEIDTKRLSKAQDAEKTFLSKLRSMER
KINDPATKISEREKLKRDVATLKRTELATVQQDISDIRQRLQENDTSSATTELQASDRHE
GESEQEYLVRTGKITPFANTRGFTRGKGDVTQNIDTSKPYTSSTITELGDIKEDDDDDGE
DEIKDEEDAEDDADAYSSGYTTDEIEPEDMELVELKKKRRRTERPETEAIDDGDEWSYQQ
RLNWWVEKRQKARARAGVIVPASDYAKEEWLLDGPEADAILEGNFKVPGEIFNALFDYQK
TCVQWLWELHTQKTGGIIGDEMGLGKTIQIISFLAGLHHSGLLTKPVIVVCPATVMKQWV
EEFHKWWPALRVVILHSMGEGSKGKKKRKGEIDSDDDDDEMIRPTPSSTKNLVETIDKVF
KDGHVVVTTYAGLKSYRSLLLDREWGYCILDEGHKIRNPDSQITLDCKQLKTVHRLILSG
TPIQNNLTELWSLLDFVCPGRLGTLPVFHSQFAVPINVGGYANATNIQVQTAYKCAVVLR
DLIAPYLLRRMKTDVATDLPKKEEKVLFCKLTDSQRLHYKGFLKSEELKSILAGKRQSLF
GIDILRKICNHPDLASREILKKTADYYYGDPAKSGKMQVVKALVDLWKKQGHRTLLFCQT
RQMLEILEDFFANMPDIKYLRMDGTTPISKRQDMVDTYNKDTSYDLFLLTTRVGGLGVNL
TGANRVIIFDPDWNPSTDLQARERSWRLGQKRNVVVYRLMTAGTIEEKIYHRQIFKQFLT
NKILKDAKQRRFFKMNDIHDLFSLDDGEGDTTETGMIFSGSEKKIENKKPEKKMKDDDDF
YQVVGLNGVSKLEKFENGEEERAESNDGDNDDNILNDIFSQTGVHSALEHDAIMDASRPE
TVIIEREAKRVAEVAAKALRDSRKKAQANDIGTVTWTGKFGSAGKFGKKKQSAGKVGVPK
FGSDKFSSSSILQNIKAKKSLEESTNAYTGLINMSDLDKVKLLEKISESLKLAGAGGLSS
KDIANEFALKLTNQEEVAVMRQLLRQAGEWNGATKKWRYKAVEDVGDEDEEIQEVVPVDE
MGNKL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggacgagttatcacggctttcggtggacgtggtcgaccagggcacgctggagaaccag
atcaccaatgaggcagactcgattctcaagaagcgcgagtttgagatcgacaccaaacgg
ctctccaaggcgcaggatgctgaaaagacgtttctcagtaaactgcggtccatggagcga
aagatcaatgatcccgccaccaagatcagcgagcgcgagaagctgaagcgcgacgtggcc
actctcaagcgcaccgagctcgccacggtccagcaggacatttctgacatcagacagcga
ctacaagagaacgacaccagcagtgcaactacagagctacaggcgtcggatcgacatgaa
ggcgagtcggaacaggagtaccttgttcgaaccggaaaaatcaccccgttcgccaacacc
agggggtttactagaggaaaaggagatgtgactcagaacattgataccagcaagccatat
acttcgagcactattactgaactcggtgatatcaaagaggacgacgacgatgacggagag
gatgaaatcaaggacgaagaagatgctgaagacgacgcggacgcttactcatctggatac
actacggacgagattgaacctgaagatatggagcttgtggagctgaaaaagaagcggaga
cgtaccgaacgaccagagacggaagctatcgacgacggagacgagtggtcttatcagcaa
cggcttaattggtgggtggaaaagcgccaaaaggctagggccagagccggagtcatcgtt
cctgccagtgactatgccaaggaggaatggcttttagacggacctgaggccgatgctatt
cttgagggcaacttcaaggtgcctggagaaatcttcaatgctctatttgactatcagaag
acgtgtgttcagtggttgtgggagctgcatacgcaaaagacgggaggtatcattggagac
gagatgggtctgggcaaaactattcaaattatcagtttcctggccggtctgcatcattct
ggtctgcttaccaaacccgtcattgtcgtgtgtcctgccacagtcatgaaacagtgggtt
gaggagttccataagtggtggccggctctgagagtggtgattttgcatagtatgggcgag
gggagcaagggcaaaaagaagcgcaaaggtgagattgactctgatgacgatgatgatgaa
atgattagacccactccttcaagcaccaagaatctcgttgagactattgacaaggtgttt
aaggacggccacgtggttgtcacgacctatgcaggtctcaaatcgtatcgctcgctgctt
ctggaccgtgaatggggctattgcattcttgatgagggtcacaagattcgaaatcctgac
tctcaaatcactctcgactgcaagcagctcaagacggtgcatcggctgattctgtcagga
acacctattcagaacaacctcaccgagctgtggagtttgttggattttgtttgtcccggt
cgactgggtaccctgcctgtctttcactcgcagtttgctgttcctatcaacgttggaggg
tacgccaatgctactaacatccaggtccagactgcctacaagtgtgccgttgtacttcga
gacctgatcgcaccgtatctcttgcgtcgaatgaagactgatgtggccactgatctgccc
aagaaggaggagaaggtgctcttctgcaaactgacggactcgcaaaggctgcattacaag
ggtttcctcaagtccgaagaactcaaatcgattctggccggaaaacggcagtcactattt
ggtatcgacatcctacgtaagatttgcaaccaccctgacctcgcgtctcgagagatcctc
aagaagacagcggattactactacggagaccctgccaaatcaggaaagatgcaggtggtc
aaggctcttgtggatctgtggaagaagcagggtcacaggacgcttcttttctgccagact
cgtcagatgttggagatcctggaagacttctttgctaacatgcctgacatcaagtatctt
cgaatggacggcaccacacccatttccaagcggcaggatatggtagacacatacaacaag
gacacgtcgtacgatttgtttttgttgacaactcgagtgggagggcttggtgtgaacctc
actggagcaaatcgtgtcatcatttttgaccctgattggaaccccagtacggatctgcaa
gctcgagaacgatcctggcgtctgggacagaaacgaaatgttgttgtctaccgcttgatg
acggcaggtacgattgaagagaaaatctatcatcggcagatcttcaagcagtttctgacc
aacaagattctcaaggatgccaagcagcgtcgtttcttcaagatgaacgacattcacgat
ctgttttcgcttgacgacggagaaggagacaccaccgagacgggtatgattttctccggt
tccgaaaagaagattgagaacaagaaacccgagaagaagatgaaggacgacgacgacttc
taccaggtggtcggtctcaatggagtgtccaagcttgagaagtttgagaacggcgaggag
gaacgagccgagagtaatgacggagataacgatgacaacattctcaacgacatcttctct
cagaccggtgtgcattctgcacttgaacacgacgctatcatggatgcgtctcgtccagag
accgttatcatcgaacgagaggctaagagagttgctgaagtagctgccaaagctctcaga
gactcgcggaagaaggcacaggccaacgacattggaactgtgacttggacgggcaagttt
ggcagtgccggaaagtttggcaagaagaagcagtcggctggtaaagtcggagtgccgaaa
tttgggtcagacaagttctcttcgtcctccattctgcaaaacattaaggcgaagaaatcc
ctggaggagtctactaatgcatacactggtctgatcaacatgagcgatctggacaaggtc
aagctgctggagaagatcagcgagagtctcaaactggccggagcaggaggcttgtcgtcg
aaagacattgccaacgagtttgctctcaagttgactaatcaggaggaggtggcagtcatg
agacagctactgagacaggctggagagtggaatggagccacgaagaagtggaggtataag
gccgtcgaggatgtgggagatgaggacgaggagatacaggaggtggtccccgtggatgaa
atgggaaataaactgtag
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integrated database retrieval system
