Yersinia pestis D106004: YPD4_0311
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Entry
YPD4_0311 CDS
T01832
Symbol
frdB
Name
(GenBank) succinate dehydrogenase
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ypd
Yersinia pestis D106004
Pathway
ypd00020
Citrate cycle (TCA cycle)
ypd00190
Oxidative phosphorylation
ypd00620
Pyruvate metabolism
ypd00650
Butanoate metabolism
ypd01100
Metabolic pathways
ypd01110
Biosynthesis of secondary metabolites
ypd01120
Microbial metabolism in diverse environments
ypd01200
Carbon metabolism
ypd02020
Two-component system
Module
ypd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ypd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypd_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ypd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YPD4_0311 (frdB)
00620 Pyruvate metabolism
YPD4_0311 (frdB)
00650 Butanoate metabolism
YPD4_0311 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
YPD4_0311 (frdB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPD4_0311 (frdB)
Enzymes [BR:
ypd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YPD4_0311 (frdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_7
Fer4_16
Fer4_18
Fer4_9
Fer4
Fer4_2
Fer4_4
Fer2
Fer4_21
Fer4_6
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
ACY57220
LinkDB
All DBs
Position
complement(364061..364795)
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AA seq
244 aa
AA seq
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MTDMKVLKMEVMRYNPERDSEPHFETFEVPYDEQTSLLDALGYIKDNLAPDLSYRWSCRM
AICGSCGMMVNKVPKLACKTFLREYTAGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY
IIGNERLPKDGPNKQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY
NLDNRDHGKKERMPQLNGKNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKIDSAKDFMIAM
LKPQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatgaaagtcctgaaaatggaagtcatgcgctataacccggaacgtgatagc
gaacctcactttgaaaccttcgaagtgccttacgatgaacagacgtctctgctggatgca
ctgggttatatcaaagataacctggcaccggatctctcctatcgctggtcttgtcgaatg
gcgatttgtggttcctgcggcatgatggtcaacaaggtgccaaaactcgcctgtaagacc
ttcctgcgggaatatactgcggggatgaaagtcgaagcattgggtaacttcccgattgaa
cgtgatttagtggttgatatgactcactttatcgagagtctggaagccatcaaaccttat
atcattggtaacgaacgcctacccaaggatggcccgaacaagcagacgccagcccagatg
gcgaaataccatcagttctctggctgtatcaactgtggtttgtgctatgccgcctgccca
cagtttggcttaaaccctgagtttattggccccgcagcaatcaccctggcgcatcgttac
aatttggacaaccgtgaccacggtaagaaagagcgtatgcctcagctaaacggtaaaaat
ggtgtctggagctgtaccttcgtcggctactgttctgaagtgtgtccaaaacacgttgat
cccgcggcggctatccagcagggcaagatcgacagtgcgaaagacttcatgatcgccatg
ctgaaaccacaataa
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